Paenibacillus borealis: PBOR_20285
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Entry
PBOR_20285 CDS
T03324
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBOR_20285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_20285
Enzymes [BR:
pbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PBOR_20285
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PBOR_20285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIQ59007
UniProt:
A0A089LDT6
LinkDB
All DBs
Position
complement(4667972..4668829)
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AA seq
285 aa
AA seq
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MTLNPGIGAHVSIRGGYGQAARFARESGASCFQYFPKNPRSLKLKPVDYRDARSCADYCR
DQGMVSIAHTPYPTNLAADPAGRAIMAASLRNDLEIAEACGSLGIVVHFGHFAGMEPLQG
YQNIIQCINDTLSGWEGQTKLLIENMAGNHGHEGMTLEELVKVRELSRYPDKIGFCFDTC
HAFASGIWNPQHTDELLQRGEALGYWPHLAAVHLNDSLFPCGSRRDRHAQIGQGHIGGKA
LRELLTSVPLRKVAAVAMETEKGPDGTHRAEIAEVRHWFEAEDES
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttaatcccggtataggggcacatgtcagcatacgcggcggatacgggcaggct
gcccggttcgccagggagagcggtgcgtcatgttttcaatattttccgaagaatccgcgg
agtctgaagcttaagccggtggactacagggatgcgcgcagctgtgccgattattgccgg
gatcaggggatggtctcgattgcccataccccttatcctaccaatctggccgcagatccc
gcaggcagagccattatggctgcttcgctgcgcaatgatctggagatcgccgaggcttgc
ggttccctgggcattgtggtgcatttcggccattttgccggaatggagccattacaaggt
tatcaaaatattatacaatgtataaatgacaccctgtcaggatgggaaggccagacaaag
ctgctgatcgagaatatggctggcaatcacggccatgaaggcatgacgctggaggagctg
gtcaaagtccgtgagctgagccgctatccggacaaaatcggcttctgcttcgatacctgt
catgccttcgcatcagggatttggaatcctcagcatactgatgagctgctgcagagggga
gaagcactcggctactggccgcatcttgctgccgtacatctgaacgactccctgttcccc
tgcggctccaggcgggacagacatgcccagatcgggcaaggccatattggcgggaaggcg
ctcagggagctgctgacctctgttcccctgcgcaaggtggcagcggttgcgatggaaacg
gaaaaaggtcctgacggcactcacagggcggaaattgctgaagtcaggcattggtttgaa
gcggaggatgaatcgtga
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