Paenibacillus borealis: PBOR_21245
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Entry
PBOR_21245 CDS
T03324
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbd
Paenibacillus borealis
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbd03016
]
PBOR_21245
Enzymes [BR:
pbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PBOR_21245
Transfer RNA biogenesis [BR:
pbd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBOR_21245
Prokaryotic type
PBOR_21245
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIQ59180
UniProt:
A0A089LGE4
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All DBs
Position
complement(4877967..4878881)
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AA seq
304 aa
AA seq
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MSELTGVLAVYKPAGFTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYVATLRLGLASDTEDLTGTITESVEEVQVTEAEVLAVLNSFKGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIEMQDMVWSGNYPDITFRVLCSKGTYIRT
LCVDIGRALGVPGVMVKLERTMSAGISASHCLTLEQIAEHKEAGTLEEHLIAADEAISHL
PKHTVAEEKKKAALQGQRLSLRFVAPEVKGSGDFRLYDLQGEFLGIYALEATGAIAPVKV
FAQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttacaggtgttctggccgtatataagccggcagggttcacttcacatgat
gttgtggccaaggcaaggcgaattctgggcatgaagcggatcggacataccggtacgctt
gatccacaagtgaccggagtgcttccgttatgtctgggacgggctacgcgggtggttgag
tacatccaggagctgcctaaggagtatgtggctacactgcggctgggacttgccagtgat
acagaggatttaacagggacgattacggaatcagttgaagaggttcaggttacggaagct
gaagtgctggctgtgctgaattccttcaaaggcgtgatttcacaggttcccccgatgtat
tccgcagtaaaggtggatggcaagcgtctgtacgagctggcccgagaaggcaagacagtg
gaacgtaagagccgcgaagtggaaatttatgagattgaaatgcaggatatggtctggagt
ggcaattatcccgatattacgttccgggtactatgctccaaaggaacgtacatccgtacc
ctatgcgtggatatcgggcgtgcgcttggagtgccgggtgtgatggtgaagctggaacgg
accatgtcggctgggatatctgccagtcattgcctgaccctggagcaaattgccgaacat
aaggaagcgggtacgctggaagagcacttaattgccgccgatgaggcgatttcgcatttg
cccaaacatacagtagccgaggagaagaagaaagccgccctgcaagggcagcgtctgtcg
ctccgctttgtggcaccggaagtgaagggaagcggagatttccggctgtatgatctgcag
ggggagtttctgggcatctatgctttagaagctaccggtgcgattgctcctgttaaagtg
tttgcacaggcttaa
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