KEGG   Paenibacillus borealis: PBOR_31640
Entry
PBOR_31640        CDS       T03324                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K03090  RNA polymerase sigma-B factor
Organism
pbd  Paenibacillus borealis
Brite
KEGG Orthology (KO) [BR:pbd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbd03021]
    PBOR_31640
Transcription machinery [BR:pbd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PBOR_31640
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 Sigma70_ECF GerE HTH_50 HTH_38 HTH_28 Cyclophil_like2 HTH_Tnp_ISL3 KORA DUF1492 TnsD HTH_24 MarR HTH_29 HTH_31 MarR_2 HTH_10 Phage_antitermQ HTH_3 DUF7343
Other DBs
NCBI-ProteinID: AIQ60958
UniProt: A0A089LP35
LinkDB
Position
complement(7191023..7191793)
AA seq 256 aa
MNDKVTPPESMNEAVTLIWEYQQSKDNEIATVLIRKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTIRLERSPAVEEIAHYLDLTVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDANDYETVEKRMDLQQALGQLKEQEQQVLLLAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMANSSY
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaacgacaaagtgactcccccagagtccatgaatgaagcagtaaccctgatctgggaa
taccagcagagtaaagacaatgaaatagctacagtgcttatccgtaaatacgagcctatg
gtgaagatggcagccggcaaaattgcccgtaaccgtccggatctctatgaggatctgtac
caggtagggcaaatggcgctgatccggttattgcagcagtatgatatcagcctcgggata
ccttttgagccttatgcgatgaaaagcatgatcggacatatgaagaatttcctgcgtgat
aaatcctggtacatacaggttccaagacggatcaaagagaagggcgcacttgtacagcag
gccattgatgagctaaccattagattggaacgttcccctgcggtggaggaaattgcccac
tatctggatcttactgtggaagaaaccgtggaagtactggccggcagggaatgttatcat
tatgtttcccttgattcaccgctctcccaagaagagacgggggctacacttggcgaatta
atcagctcagatgccaatgattatgagactgtggagaagcgaatggatctccagcaggcg
ctgggacaactcaaggaacaggagcagcaggtactgctgctggcgttccaggatggccag
tcacagcgtgccattgcccagaagctcggagtatcgcagatgagtgtttcccgtatacag
aagcgtgctaccgagaagctgaagcagattatggcgaattcctcttattaa

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