Paenibacillus borealis: PBOR_32705
Help
Entry
PBOR_32705 CDS
T03324
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PBOR_32705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbd03021
]
PBOR_32705
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_32705
Enzymes [BR:
pbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PBOR_32705
Transcription machinery [BR:
pbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PBOR_32705
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PBOR_32705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
PASTA
HHH_5
OPA3
Motif
Other DBs
NCBI-ProteinID:
AIQ61125
UniProt:
A0A089LM02
LinkDB
All DBs
Position
complement(7387941..7388885)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEANDDGTYGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGIVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFAGRGRGYVQADRNKRDDQPIGVIPVDSIYTPISRVNYGI
DNTRVGQVTNYDKLTLEIWTDGSIRPEEAVSLGAKILNEHLVLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaagattgagaccgtagaagccaatgatgatggaacctat
gggaaattcgtaattgaaccgctggaacgtggatatggcacgactctggggaattcgctt
cgccggatcttgctttcctcccttccgggagccgcagtgacttcggtccaaattgacggc
gttctgcatgagttctcgaccgttcccggcgtaatggaagatgtgacggaaatcatcctg
aaccttaaagctctttctctgaagattcattcggatgaagagaaagtgttcgagattgat
gctgaaggagaaggcatcgttaccgcaggtgatattcgtgcggatagcgatgttgagatc
ctgaacccggatcttcatattgcaacgctgggacctggagcgagactacacatgcgcatt
tttgcaggccgtggtcgcggctacgtccaagcggaccggaacaaacgcgacgatcagcca
atcggtgttattccagttgactccatctacactcctatttcccgcgtgaattatggtatt
gataatacccgtgttggtcaagtgactaactatgataagttgacgctggaaatttggacg
gatggtagcatcagaccagaagaagccgttagtcttggagccaaaattttgaacgagcac
ctcgttctgttcgtaggtcttacggacgaagcgaaagacgccgaaattatggtggaaaaa
gaagaagataaaaaagaaaaagtactcgagatgaccatcgaagagcttgatctttctgtc
cgttcctacaactgcctcaaacgtgccggtattaataccgtgcaagagctgactacgaaa
actgaagaagatatgatgaaggttcgtaacctgggccgcaaatctttggaagaagttcaa
gagaagcttgaggaactcggtttgggtcttcgtacagaagaatag
DBGET
integrated database retrieval system
