Paenibacillus borealis: PBOR_32895
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Entry
PBOR_32895 CDS
T03324
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PBOR_32895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbd03021
]
PBOR_32895
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_32895
Enzymes [BR:
pbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PBOR_32895
Transcription machinery [BR:
pbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PBOR_32895
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PBOR_32895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AIQ61162
UniProt:
A0A089LJT8
LinkDB
All DBs
Position
complement(7411258..7414869)
Genome browser
AA seq
1203 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGETPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DIDIDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNKPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKK
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPILVEGHAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLASGNIL
NPKDGKPVVTPSQDMVLGTFYLTMDNKEEKGTGMILRTVNEAVSAYQRGTAGLHARVAIP
VKALGKTNFTEAQQNALLITTVGKIIFNEIYPSSFPYINEATKTNLLQGTPEKYFIYEKG
ADVRELIMAAPEASAVGKEYLGLIIARCFETYHTTKTSVILDKIKQLGFTYSTRSGVTVA
VSDVIVPEEKATILKESEAKVDVVANQYRRGLITNDERYDRVIEIWSKTKDELTNVLLKS
MDRFNSIMLMVDSKARGNKSQITQLGGMRGLMATPSGRIFELPIKANFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRIEGRYSFETVRHPETKEIIVHRNDLIDSDKAEEIVNSGVTKLQIRSVLSCRARHGVC
KKCYGRNLATGKFVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVVKEIRETKDRREIEVQGEAESKTYSITYGSRLRVSEGQEIEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHIEVMIKQMLRKIRI
IDAGDTTLLPGAFADIHEYEAANKEAILAGNEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRNVKLSDPNEESKQAALETV
PAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaattttgaatttatgaaaatcgggctcgcttccccggaaaaaatt
cgttcttggtcccgcggagaagtaaaaaaaccggagaccattaactatcgtactttgaaa
ccggaaaaagagggtcttttttgcgaacgcatcttcggaccgcaaaaagactgggaatgt
cactgtggtaaatacaaacgcgtccgttataagggcgttgtgtgcgaccgctgcggcgtg
gaagttacccgcgctaaagtccgccgcgaacgtatgggccacatcgagctggcagctccg
gtatctcatatctggtatttcaaaggtattccgagccgtatgggtctggcactggatatg
tctccgagatcgcttgaagagattatctactttgcatcttatgttgtaaccgatccgggt
gaaactcctctggagaagaaacaactgctgtctgagaaagaataccgcagctaccgtgag
aaatacggctacgggttccaggccggcatgggtgctgaagccgtcaaaaagctgcttcag
gatatcgatatcgataaagaactggaattcctcaaagaagagctgcgcacggcccaaggc
cagcgccgcaaccgggcgatcaaacgtctggaagttattgaggctttccgcaactccggc
aacaagcctgactggatgatcatggatgtgctcccggtcattcctccggagcttcgccct
atggttcagctcgacggcggccgttttgctacgtctgaccttaacgacctgtaccgccgt
gtaattaaccgtaacaaccgtctgaagagactgctggatctcggtgctcctgatattatc
gtgcagaatgagaaacggatgcttcaggaagctgttgatgccctgatcgacaatggccgc
cgcggccgtcctgtaacaggtcctggtaaccgtccgctcaaatcgctcagccatatgctg
aaaggtaaacaagggcgtttccgccagaacttgcttggtaagcgcgttgactattccgga
cgttccgttatcgtcgtagggccttacctcaagatgtaccaatgcggtcttcctaagaag
atggcactggaactcttcaaaccgtttgtaatgaaagaattggttaataagggccttgcc
cacaacatcaagagcgcgaaacgcaaggttgagcgcgtaagtcctgaagtctgggatgta
cttgaagaagtaatcagagagcatccggttctgctgaaccgtgctcctacactgcataga
ctgggtatccaggcgtttgaaccgattttggtagaaggtcacgcgatccgtcttcacccg
ctcgtatgtacggcgtacaatgccgactttgacggtgaccagatggcggtacacgttcct
ctatccgctgaagctcaagctgaagcccgtattctcatgttggcatccggtaacattctc
aaccctaaagatggtaagccggttgttacaccttcccaggatatggtccttggtacattc
tatctgaccatggacaacaaggaagaaaaaggaacaggcatgattctgcgtaccgtgaac
gaggctgtttcagcttaccaacgcggaaccgctggtctgcatgcgcgtgtagctattcct
gttaaggcactgggtaaaaccaactttacagaggcacagcagaatgcattgctgattaca
acggtgggtaagattatcttcaacgaaatctatccaagcagtttcccatacatcaatgaa
gctaccaaaactaacctgctgcagggtacaccagagaagtacttcatctatgaaaaaggc
gcggatgtccgtgaattgatcatggctgctccggaagccagtgctgtaggtaaagaatat
ctgggcttaatcattgcccgctgcttcgaaacctaccacactaccaaaacttcagtgatt
ctggataaaattaagcaactcggctttacgtactctacacgttccggtgttacggttgcc
gtatcagacgttatcgtgcctgaggaaaaagctacaattcttaaagaatccgaagctaag
gttgatgtagtagcgaatcaataccgccgtggtctgattaccaatgatgaacggtatgac
cgtgttatcgagatctggtcgaagactaaggatgaacttacgaacgtcctgctgaaatcg
atggaccgtttcaactccatcatgctcatggttgactccaaagcgcgtggtaacaaatcg
cagatcacccagctcggtggtatgcgtgggctgatggctacaccttcgggccggattttc
gaattgccaatcaaagcgaacttccgtgaaggtctgaccgtcctcgagtactttatctcc
actcacggagcgcgtaaaggtctggccgatacagcgctgcgtacagcggattccgggtac
ttgacacgccgtctcgttgacgtggcacaggatgtcatcgtccgtgaagaagattgcggt
actgataaaggcttcactgtcagccggattcaagatggtaaggaagttatcgaggatctc
tacgaccgtattgaaggccgttattccttcgagactgtccgtcatccggaaacgaaggaa
atcatcgttcaccgtaacgatctgattgactctgacaaggctgaagaaattgtgaattct
ggtgttaccaaactgcagattcgctctgtactgagctgccgtgcccgtcatggtgtctgc
aagaagtgctacggacgtaacctggcaacaggtaaattcgtggaaattggggaagctgtc
ggcattattgccgcacaatccatcggtgaaccaggaacacagcttaccatgcgtacattc
cataccggcggtgttgccggagacgatatcacgcaaggtttgccgcgtatccaggagttg
tttgaagcccgtaaccctaaaggtcaggcgacaatcagtgaaattgacggggtagttaag
gaaattcgtgaaactaaggaccgccgtgaaatcgaagtccagggtgaagcagagtccaag
acctattccatcacttacggttcccgtctgcgtgtcagtgaaggccaggagattgaagcc
ggcgatgaattgacagacggttctatcgaccctaaagaaatgctgcgtatcaaagggatc
cgcggggtacagaactacattctgcaagaagtacagcgtgtataccgtaaccagggcgtt
gagatcaatgataagcacattgaagttatgattaagcagatgctgcgcaaaatccgtatc
atcgatgccggagacaccactctcctgccgggtgcttttgcggatattcatgaatatgaa
gcagccaataaggaagccattctggccggtaacgagcctgcggttgctaagccagtgctg
ctcggtattaccaaagcctctttggaaacagactccttcctgtctgcggcttctttccag
gaaactacccgcgtcttgacggatgcagcgattaagggtaaagtggataagttgctcggt
cttaaagaaaatgttatcatcggtaagctgattcctgcaggtactggcatgaatcgttac
cgtaatgtgaagcttagtgatccgaatgaagaaagcaagcaagccgctttagaaacggtt
ccagctgagtaa
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integrated database retrieval system
