KEGG   Paenibacillus borealis: PBOR_33095
Entry
PBOR_33095        CDS       T03324                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pbd  Paenibacillus borealis
Pathway
pbd03420  Nucleotide excision repair
pbd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PBOR_33095
   03430 Mismatch repair
    PBOR_33095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbd03400]
    PBOR_33095
Enzymes [BR:pbd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PBOR_33095
DNA repair and recombination proteins [BR:pbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PBOR_33095
   MMR (mismatch excision repair)
    Other MMR factors
     PBOR_33095
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PcrA_UvrD_tudor AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_11 Terminase_6N ResIII
Other DBs
NCBI-ProteinID: AIQ61198
UniProt: A0A089LPR0
LinkDB
Position
complement(7459723..7462080)
AA seq 785 aa
MQLVNIHDAVSRLNPPQRQAVEATEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQDRVSKLVGPEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNCMKDLDIDTKKFEPKAIQAVISTNKNELITPAQYEQKIGDYFEGLVAKVYTK
YQQRLRSNNSLDFDDLIMKTIQLFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRML
AEGHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEAKTILLEQNYRSTSNILNAANGV
IALNTGRKPKKLWTDSDEGAKIKVFRGDSEHDEGYFVTGEISKNVKQGQAYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSV
TELTEKILELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDEEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERR
LAYVGITRAEKQLFLSCARMRTLFGRTTANAPSRFLEEIPEELKEDTVKESDRFRRGGAE
VGGAYGGRGFGGGSRGNFGSRTAAAGNAPAGGGAASFGSGSSASAVPGAGRVVVTTGGAQ
GAPGAGAAASAGFKAGDKVAHGKWGTGTVVAVKGSGNDTELQIAFPAPVGVKRLLAGFAP
ITKVE
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgcaacttgttaacatacacgacgccgtaagccggctgaatcccccgcagcgtcaggct
gttgaagctaccgaagggcctctattgatcatggccggagcgggcagcggtaagacccgc
gtgcttacccaccggatcgcctggcttatcgcgaaccgcaaggcgccgccttgggcgatt
ctggcgattacttttacgaacaaagccgcccgggagatgcaggaccgtgtctccaagctg
gtagggccggaaggccgggatatctgggtatccaccttccactcgatgtgtgtacggatc
ctgcggaaggatattgaacggatcggcttcacttcgaacttctccattctggattcgacg
gaccagttgtccgtaatccgcaattgtatgaaggatctggacatcgataccaagaagttc
gagccgaaggcgatccaggctgtgatcagtacgaacaagaatgagctgattacaccggcg
cagtatgagcagaagatcggcgattatttcgaaggccttgtggccaaagtgtacactaag
taccagcaacggctgagaagcaataactcgctggatttcgatgacctgattatgaagacg
atccagttgttcaaggaagttcctgaggtattggatttctaccagaagaagttcaaatac
attcacgtcgatgagtatcaggatacgaaccgggcgcagtatatgctctgccggatgctg
gccgaaggccaccaccggatctgcgtagtcggggacagtgaccaatcaatctaccgctgg
cgcggggcggatatttcgaacatccttaatttcgaagaagactatccggaagccaaaacc
attctattagagcagaattaccgctcaacctccaatattctgaacgccgccaacggtgtc
atcgcactgaataccggacgcaagccgaagaagctgtggaccgattcggacgagggcgcg
aagatcaaggtgttccgcggtgactccgagcatgatgaaggatacttcgtcaccggagag
atcagcaagaatgtgaagcagggccaggcgtaccagaaccatgcgattctgtaccgtacg
aacgcccagtcccgtgtaatagaagaaattctgatcaagtcggatattccttaccagatt
gtcggcgggatcaagttctacgaccgcaaagaaattaaggatctgctggcgtatctgcgc
ctgctctccaatcccgatgatgatatcagtctgacgcggattatcaatgttcctaagcgt
ggccttggggatacgactgtcggcaaattggctgcggccgcagcttcccagggagtatcg
atcttccgggcgctgcagacggtggatgatctgggctttgccggccggacgcgcaatacg
ctggtagagttctatgatatgatcgaagccctgcaccgtatggtggaattcctctcggtg
accgagctgacagagaagattcttgaactgtcccagtaccgtctggagctgcagaatgag
aatacccttgagtcccgttcccgcctggaaaatatagacgaattcctatccgtaacgatg
gaattcgagaagaacaacgaggataagtcgctggtctccttcctgacggatctggcgctg
atcgccgacatcgacagcgtgaatgacgaagaagagcgcagcgatgctgtcgtgctgatg
acaatgcacagcgcgaagggtctggagttcccaaccgtattcatcatcgggatggaagaa
ggcgtgttcccgcacagccgtgccttccaggacaatgacgaactggaagaagaacgccgg
ctggcgtatgtgggcattacccgtgcggagaaacagctgttcctcagctgtgcacggatg
cgcacgctgttcgggcggacgaccgcgaatgcgccgtcccgcttcctggaggagattccg
gaggagctgaaggaagataccgtgaaggaatcggaccgcttccggcgcggaggcgcggag
gttggcggtgcttacggcggccgcggcttcggcggaggcagccgcgggaacttcggcagc
cgcaccgctgctgccgggaacgcgccggcaggcggcggggccgccagcttcggcagcggc
agctcggccagcgcggtgccgggcgcgggccgcgtcgtagtgacgaccggtggcgcgcag
ggcgctccgggagcaggggctgcagcgtccgccggcttcaaggcgggcgacaaggtcgcc
cacggcaaatggggcaccggcaccgttgtggccgtgaagggcagcggcaatgatacggag
ctgcagattgccttcccggcgccggtaggcgtgaagcgcctgctggccggctttgcaccg
atcaccaaagttgaataa

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