Paenibacillus borealis: PBOR_33220
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Entry
PBOR_33220 CDS
T03324
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pbd
Paenibacillus borealis
Pathway
pbd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PBOR_33220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_33220
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PBOR_33220
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PBOR_33220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_30
UvrD-helicase
AAA_7
AAA_16
AAA
AAA_19
nSTAND_NTPase5
AAA_5
AAA_25
DUF87
fvmX5
Motif
Other DBs
NCBI-ProteinID:
AIQ61221
UniProt:
A0A089LI54
LinkDB
All DBs
Position
complement(7495630..7497621)
Genome browser
AA seq
663 aa
AA seq
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MSDIVVSTKTFELESEYTPQGDQPHAIEELLDGIRQGKKHQTLLGATGTGKTFTIAQVIS
KLNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTFIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPQEYGSMLLTLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASQGEHAIRVELFGDEIERITEIDVLTGEL
IGERDHIAIFPASHFVTQEETMRVAIINIERELEERLAVLRDAGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFREPGATPYTLMDYFPDDMLIVIDESHATLPQIRAMYNGD
RARKTVLVEHGFRLPSALDNRPLQFEEFEEKVNQIVYVSATPGPYEMEHCDTMVQQIIRP
TGLLDPIIEVRPTEGQIDDLISEIRDRVERDERVLVTTLTKKMSEDLTDYFKEIGIKVRY
MHSDIKTLERMAILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSDGRVILYGDRITDSMEKAMSETQRRREIQIAHNEKHGITPTTINKKVRD
IIEATKVAESKADYLTGVGGKLSKKDKQSLMQRLEAEMKDAAKNLQFERAAELRDALLEL
RAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgtcgtcagtacaaagacatttgaactggagtccgagtatacaccccag
ggcgatcagcctcatgccatagaagaattattggacggcatccggcagggcaagaagcac
cagacgctgctgggagcgacaggtacaggtaagacctttaccatcgcacaagtgatttcc
aaactgaaccgcccgacgctggttatagcgcacaacaagacgcttgctgcgcagctggcg
agtgagttcaaagagttttttccgaacaattccgttgactacttcgtcagttactacgat
tactaccagcctgaggcgtacattccttcctccgataccttcatagagaaagattccagc
ataaatgaagaaattgataagctccgccactctgccaccagttcgttgtttgaacggcgt
gacgttattattgttgcgagtgtgtcctgcatttacggcctcggttcgccgcaggaatat
ggaagcatgcttttgacactgcgggtagggatggagaagccgcgcaatcagattctcagc
cggctcgtggatatccagtaccagcgcaatgatattaacttcgtacgcgggacgttccgg
gtgcgcggtgatgtagtcgagatcttcccggcttcacagggggagcatgcgatccgtgtg
gagctgttcggagatgagatagagcgcattaccgagattgatgttctcactggagagctg
attggtgagcgcgatcatatagcgatcttcccggcttcgcactttgttacccaggaagaa
acaatgcgtgtagctattatcaacattgagcgggagcttgaggaacggctggccgtgctt
cgtgatgcgggcaagctgctggaagcccagcgcctggagcagcggacccgttatgatatt
gagatgatgaaggaagtgggcttctgctccggtatcgagaactattccggaccgctcacc
ttccgtgagccgggagcgactccatataccttaatggattacttcccggatgatatgctg
attgttattgatgagtcccatgcaacgctgccgcagatccgggctatgtacaatggtgac
cgtgcgcgtaagaccgtgctggtggagcatggcttccgcctcccgtccgcgctggataac
cgtccgctgcagttcgaggaattcgaagagaaagtgaaccagattgtatatgtttcagct
acaccgggaccttacgagatggagcactgcgatactatggtgcagcagattatccgtcct
accggcctgcttgatccgattattgaagtacgccctacagaggggcagatcgatgatctg
atcagtgaaatccgtgaccgtgtagaacgtgatgaacgtgtactcgttacaacacttacg
aagaagatgtccgaggacctgaccgattacttcaaggaaatcgggattaaggtgcggtac
atgcactccgatatcaagacgttggagcggatggccatcctgcgtgatctccggctcggt
acgttccatgtactggtgggtattaacttattaagagagggtcttgacctgccggaggtc
tcccttgtcgccatcctcgatgccgataaggaaggcttcctccgctccgagcgttcgctc
attcagacgatcggccgggcggcccgtaactctgatggacgtgtcattctgtacggcgac
cgtattacggattccatggagaaggcgatgagcgaaacccagcgccgccgtgaaattcag
attgcccataatgagaagcacggcatcacccctacgacaatcaacaagaaagtgcgtgac
atcatcgaggccaccaaagtggccgagtcgaaggccgattacctcaccggtgttggcggc
aagctaagcaagaaagacaagcagagcctgatgcagcgtctggaggccgagatgaaggac
gcggccaagaacctgcaattcgaacgcgccgccgagctgcgcgatgctttactcgaactg
cgtgcagagtaa
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