Paenibacillus borealis: PBOR_34190
Help
Entry
PBOR_34190 CDS
T03324
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03022
Basal transcription factors
pbd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PBOR_34190
09124 Replication and repair
03420 Nucleotide excision repair
PBOR_34190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbd03021
]
PBOR_34190
03036 Chromosome and associated proteins [BR:
pbd03036
]
PBOR_34190
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_34190
Enzymes [BR:
pbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PBOR_34190
Transcription machinery [BR:
pbd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PBOR_34190
Chromosome and associated proteins [BR:
pbd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PBOR_34190
DNA repair and recombination proteins [BR:
pbd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PBOR_34190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIQ61396
UniProt:
A0A089LIS9
LinkDB
All DBs
Position
complement(7726190..7728505)
Genome browser
AA seq
771 aa
AA seq
DB search
MLSYAEIALSVRALVEYAFSSGSLEPGFRSGAAMVEGTRSHQLIQKQYKEGDRKEVYLKT
EIPRGNLLFIIDGRCDGLLAAGDGSLTVEEIKSMSGTPDSSLEGREVHWAQAFMYAYILT
QDLDLPAIQVKLTYVQRGSGEQYSLYRGMTREALTAFAEETVARYAPYAEMMVRYKAKRE
ESIHSLSFPFPAYRPGQRHFAAAVYTSIAEGANLFAQAPTGIGKTMSTLFPAVKALGEDK
ISGIFYLTAKTVTRIAAQEAVIMLNSQGLHLHVIALTAKEKACFREEGICGADACPFAEG
YYDRINAAMIDMLEHETLMTRETIAGYARKHEVCPFEFSLDAAYACDVVICDYNYVYDPR
ISLKRMSEERKKKTALLVDEAHNLVDRGREMYSASLTKAPFLALQRQYKTAYPRLSSAAK
AVNAFFIALRKSCGDKGAGEWSEYPGELPELLELFAAEAELELLQPSSLITPAAEEGEAG
SLLDTFYAVQGMLRTFKTYDERYITYAEVRSGDVYLKLFNLDPSHLLQQMAKSFRSQILF
SATLAPLSYYRDMIGAGEEDYSLSLSSPFHKEQWQVSVLPVSTRYHDREASLQPLSDALQ
GMVSRKGNYLVFFPSYLYLKNVYEVFTEKYPEVTTLLQGSGMSETERENFLAAFRPDNPD
TLLGFAVLGGIFSEGVDLPGDRLNGVMVVGVGLPQVGLERNLLRSYFQSQGKNGFDYAYV
YPGMCKVQQAGGRLIRSENDSGTIVLADDRFLQNSYRQLLPEEWRDYFVMA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttatgcagaaatcgctctatccgtgagagcactggtggagtatgccttcagc
agcggcagtctggagccgggattccgcagcggcgcagccatggtggagggtacgcgcagc
catcagctaattcagaagcaatataaggaaggggaccgcaaggaggtttatttgaaaacg
gagattccccgcgggaatctgctgttcatcatcgacgggcgctgcgacggcctgcttgct
gccggggacggcagcctgaccgtggaggagatcaaatccatgtcaggaacgccggattcc
tccctggagggacgggaggtacactgggcgcaggctttcatgtacgcctacatccttaca
caagatctggatctccctgcaatacaggttaagctaacctatgtgcagcggggaagcggg
gagcaatacagcctgtacaggggaatgacccgcgaagcgctgacggccttcgctgaagag
acggtagccaggtatgcgccttatgccgagatgatggtccgctacaaggcaaagagggag
gagagcatccatagcctgtcttttccgttcccggcttaccggcccggccagcgtcatttc
gctgccgctgtctatacttcgattgcagagggggccaatctcttcgcccaggcacctaca
ggcatcggcaaaacgatgtccaccctgtttcctgcggtcaaagcgcttggtgaggacaag
atatccggcatcttttatctgacggccaagacggttacacggattgcggcacaggaggcg
gtgataatgctgaacagccaggggctgcatctgcatgtaattgcgcttacggcgaaggag
aaggcttgcttccgtgaggaaggaatctgcggcgccgacgcctgcccctttgccgaaggc
tactatgaccggatcaatgccgccatgattgatatgctggagcacgaaacgctgatgacg
cgcgagacaattgccggttatgcccggaagcatgaggtatgcccgtttgaattctccctc
gatgccgcctacgcctgcgatgttgtcatttgcgattataattatgtctatgatccccgg
atcagcctgaaacggatgtccgaggagcggaagaaaaagacagcgctgctcgtagatgaa
gcgcataatctggtggaccggggacgcgagatgtattctgcctcgcttaccaaggcgccg
ttcctggcgcttcagcggcagtacaaaacggcctatccgcggctaagcagcgccgcgaag
gccgtaaatgccttcttcatcgcgctgcgtaagagctgtggcgataagggggccggggag
tggagcgagtatcccggggagctgccggagctgctggagctattcgctgctgaagccgag
ctggagctgctccagccttcttccttgatcactccggcggcggaggagggggaagccggc
agcctgctggatacgttctatgcggtacagggaatgctgcgtacgttcaagacctatgat
gagcgctacattacctatgcggaagtgcgcagcggtgatgtgtacctgaagctgttcaat
ctcgatccttcacatttgctgcagcaaatggctaagagcttccgcagccagatcctgttc
tcagcgacacttgcgccgctctcgtattacagggatatgatcggcgcaggggaggaggac
tacagcctgagcctgtcctcgccttttcataaagagcagtggcaggtatctgtgcttccg
gtatccacccgctaccatgacagggaggcctctttacagccccttagcgatgcactccaa
gggatggtctcgaggaagggcaattaccttgtattctttccctcttatctatatttgaag
aatgtatatgaagtgttcactgagaaatacccggaggtcactacccttctgcagggcagc
ggcatgagcgagactgagcgggagaacttccttgcggcgttccgcccggacaatccggat
actctgctcggctttgctgtgctgggcgggattttctccgaaggggtggatttgcctggt
gaccggctgaatggtgtgatggtggtaggtgtcggcctgccgcaggtggggctggaacgc
aatctgctgcggagctactttcagtcgcagggcaagaacgggttcgattatgcctatgtc
tacccgggcatgtgcaaggtgcagcaggctggagggcggctgatccgcagcgagaacgac
agcggcactattgtgctggcggatgaccgctttctgcagaattcttaccggcagctgctc
cctgaggagtggcgggactactttgtcatggcataa
DBGET
integrated database retrieval system
