Plasmodium berghei: 55148316
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Entry
55148316 CDS
T01111
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03030
DNA replication
pbe03410
Base excision repair
pbe03420
Nucleotide excision repair
pbe03430
Mismatch repair
pbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
55148316
03410 Base excision repair
55148316
03420 Nucleotide excision repair
55148316
03430 Mismatch repair
55148316
03440 Homologous recombination
55148316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
55148316
03400 DNA repair and recombination proteins [BR:
pbe03400
]
55148316
Enzymes [BR:
pbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
55148316
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
55148316
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
55148316
MMR (mismatch excision repair)
DNA polymerase delta complex
55148316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
E2-Crich
Motif
Other DBs
NCBI-GeneID:
55148316
NCBI-ProteinID:
XP_034420253
UniProt:
A0A509ADQ6
LinkDB
All DBs
Position
5:<53651..>56944
Genome browser
AA seq
1097 aa
AA seq
DB search
MEKNIFSATNVIPYGPLYDKAKNVKNNDQDENYHIVEEYEKLLKIYERPNPYDSNGSLKF
SSNDDLLLFQIDLDYTVENIFRNVIYSNEGSTNNRDSKCDSIYESYKIILGKEKNFISVP
IIRIYSITNCGYSVVVNVHNFFPYFYVEKPNGFNNDDMIKLESMLNETLSLNNQFKMYEN
KILKIEAVKTESIMYFKKSGKTDFLKITVLLPKMVPSLKKYFESGINVNSKHFGGIVYEA
NLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQSSNCTFEIDIHYENIEPMALENEYQ
KIPKLRILSFDIECIKLDGKGFPEAKTDPIIQISSILYLQGDPIENCAKFIFTLLECASI
PGSNVIWFNDEKTMLEAWNEFVIRIDPDFLTGYNIINFDIPYILNRGTALNLKKLKYIGR
IKNIPSLVKDANFSSKQFGSHETKEININGRIQFDVYDLIKRDYRLKSYTLNYVSFEFLK
EQKEDVHYSIMNDLQNENSESRKRIATYCIKDGLLPLRLIDKLLFIYNYVEMARVTGTPF
VYLLTRGQQIKVTSQLYRKCKELNYIIPSTYIKVSNNDKFEGATVLEPIKGYYIEPISTL
DFASLYPSIMIAHNLCYSTLIKNNDEISDLNKNDITTVPGKNNFKFVKGNVKRGVLPLIV
EELIRARKNVKAMMKNEQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATS
ITTFGRSMIEKTKETVEAYYCKNNGFEHNATVVYGDTDSVMVKFGTNDVGEAMRLGKDAA
ERISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILI
QQMMETVLNKLLIEKDLNSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKAEYETRLPHVE
LAKKLKQRDSATAPNVGDRVSYIIIKGTKGQAQYERAEDPLYVLDNNLSIDHNHYLDAIK
NPLSRIFEVIMQNSDSLFCGEHTRHKTILTSSQTALSKFLKKTIRCIGCNSSIKKPPLCN
HCKANKEFSIYMQKIKDLKLKQNEFFQLWTECQRCQGNLHIDVICMNRDCPIFYRRAKIK
KDVANLQEQVTSLKIEW
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatatattctcggccacaaatgtaattccttacggccctctttacgataaa
gcaaaaaatgtgaaaaataatgatcaagatgaaaattatcacattgtagaagaatacgaa
aagttgctaaaaatatatgagagaccaaatccgtatgattcaaatggctctttaaaattc
agcagcaatgatgatttgctgttatttcagatcgatttagattacaccgtggaaaatata
tttcgaaacgtgatttatagtaatgaaggttctacaaataatagagattctaaatgtgat
agtatctatgagtcatataaaataatcctaggcaaagaaaaaaatttcatatcagttcca
attattcgaatatatagtatcacaaattgcggatatagtgttgtagtgaatgttcacaat
tttttcccatatttttatgtagagaaaccaaacggttttaataatgatgatatgataaaa
ctcgaatccatgctaaatgaaaccctgagtctaaataatcaatttaagatgtatgaaaat
aaaatattaaaaattgaagctgttaaaacagaaagtattatgtattttaaaaaatcagga
aaaacagactttttaaaaataactgtcttattacctaagatggttccatcattaaaaaaa
tattttgaaagtggtataaatgttaacagtaagcatttcggtggtatcgtatatgaagcc
aatttaccatttattttaagatatattattgataaaaaaataacagggtcatcgtggatt
aaatgtgaaaagaatagttatattatacgaagtaaaaataaacaatcgtctaattgcaca
tttgaaatagatatacattatgaaaatatagaacctatggcgttagaaaatgaataccaa
aaaattcccaaattaagaatcctttcctttgatattgagtgtataaaattagatggaaaa
ggttttccagaagcaaaaacagatcctattatacaaatatcgtcaattttatatttacaa
ggtgacccaattgaaaattgtgcaaaatttatttttacacttttagaatgtgctagtata
ccaggctcaaatgttatatggtttaatgatgaaaagacaatgttagaagcatggaatgaa
tttgttataagaatagacccagattttttaacaggttataatatcataaattttgatata
ccatatatattaaacagaggtactgctttaaacttaaaaaaattaaaatatataggtaga
ataaaaaatattccaagtcttgttaaagacgctaatttttcttcaaaacaatttgggtca
catgaaacaaaagaaattaatattaatggaagaatacaattcgatgtttacgatctaatt
aaaagagattatagattaaaatcgtataccttaaactatgtgtcatttgaattcttaaaa
gaacaaaaagaagatgtccattatagcataatgaacgatttgcaaaatgaaaattcggaa
tcgcgtaaacgaattgccacttattgcattaaggatggtttattacccttacgattaatt
gataaactattatttatttataattatgtagaaatggctagagttactggtacaccattt
gtttatctattaactagaggccaacaaattaaagttacttcacaattatatagaaaatgt
aaagaattaaattatattattcctagcacatatattaaagttagtaataatgataaattt
gaaggtgctacggttttagagccaataaaaggttattatatagagcctatttctactctc
gactttgcatctttatatccatctattatgatcgcccacaatttatgttattctacactc
ataaaaaataatgatgaaatttctgatctaaataaaaatgatataacaactgtaccagga
aaaaataattttaaatttgttaaaggtaatgtaaaacgtggtgtattaccattaattgtc
gaagaattaataagagctcgaaaaaacgtaaaagctatgatgaaaaatgagcaaaatcca
attacaaaaatggtacttaatggcagacaattagcgcttaaaatatcagcaaattcagtt
tatggatatactggtgcagcggctggaggtcagttgccttgcttagaaatagctacctca
attactacattcggtagatctatgatagaaaaaacaaaagaaacagttgaagcatattat
tgtaaaaataatgggtttgaacacaatgcaactgttgtatatggtgatacagattctgta
atggttaaatttggtacaaatgatgttggagaagcaatgcgattaggtaaagatgcagca
gaaagaataagtaaagaatttttacatcctattaaattagaatttgaaaaagtatattgt
ccatatttattacttaataaaaaaagatatgcaggcttattatacactaatccaaataaa
catgataaaatggattgtaaaggtatcgaaactgttagaagagatttttgcatacttata
caacaaatgatggaaactgttttaaataaattattaatagaaaaagatttaaatagtgcc
atcgagtataccaaaagtaaaattaaagatttattaacaaataatatagatatgagcctg
ctagttgtaactaaatcattaggaaaagctgaatatgaaactagattgccacatgtagaa
ttagcaaaaaaattgaaacaacgagatagtgctacggctcccaatgttggcgatagagtt
agttatattattataaaaggcacaaaaggacaagcacaatatgaaagagccgaagatcca
ttatatgtattagataataatttgtcaatagatcataatcattatctagatgctatcaaa
aacccactatctagaatatttgaggttattatgcaaaattcagactctttattttgtgga
gagcatacaaggcataaaactattttaacgtcaagtcaaacagctttatcaaaatttctt
aaaaaaacaattagatgcataggttgtaacagttcaattaaaaagccaccattatgtaac
cattgtaaagcgaacaaagaattctctatttatatgcaaaaaattaaagatttaaaactc
aaacaaaacgagttctttcagctatggactgaatgccaaagatgtcaggggaatttacac
atagacgtcatttgcatgaatagggattgtcccatattttacaggagagcaaaaattaag
aaggatgtagcaaaccttcaagaacaagttacatccctcaaaattgaatggtaa
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