KEGG   Plasmodium berghei: 55148479
Entry
55148479          CDS       T01111                                 
Name
(RefSeq) pre-mRNA-splicing factor CEF1, putative
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pbe  Plasmodium berghei
Pathway
pbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    55148479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbe03041]
    55148479
   03400 DNA repair and recombination proteins [BR:pbe03400]
    55148479
Spliceosome [BR:pbe03041]
 Complex B
  Other components
   Prp19 complex
    55148479
 Complex C
   Prp19-CDC5 complex
    55148479
DNA repair and recombination proteins [BR:pbe03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    55148479
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 C45G9_C
Other DBs
NCBI-GeneID: 55148479
NCBI-ProteinID: XP_034420415
UniProt: A0A509AII6
LinkDB
Position
5:complement(<637132..>639843)
AA seq 903 aa
MRIQIKGGIWKNCEDEVLKAAVMKYGLNNWSRVASLLVRKSAKQCKARWYEWLDPSVKKT
EWSKEEEEKLLHLAKLFPTQWRTIAPVVGRTAQQCLEHYEYLLDEAEGKVYDKNKNPRHL
RPGEIDPAPETRPARADPVDMDDEEKEMLAEAKARLANTKGKKAKRKAREKQLEQARRLA
LLQKKRELKAAGIVSNNHYKKNDKNKIDHINEILFERKPLKGFYNVENEQNIEDQSQYRN
KNNKDQSISGDSNNKIRSIKSMDVENINKLTDLGQDDNKQNKRGKKNKNEEHDLLNAIEN
YDKQFNELSHLRKRVRLNLPEPVLNENELDEIIQINKEATSFNQIIKDYNDNNLANGPIN
NILPSIASTPFVLNQGDMLSSIGTNFYNDNNKSIKFSSVLDHSIQQAAQSIISNNMNMPI
LYRNEEFTKDSQKKGQYNKSYFKNDETIEEGNIFDDDNNNALDDIRERSKKIKEEIENNQ
NKIKNEENIAENQRISAKNKIISDIKSFRKNISAYAQSIISYKGFKNDNSMINPSALVNE
NMIDEDDDNYEERVDRAKLLIKSSLANLPKETNVIELQMPEKDNIPNEDGEIGVELEEDA
QEAEKKKKMEEIKKEQDKFNKQNKVIQWNLPRPCFLQKINIFNVPNININEEEKLIQKEL
LSLIKNDMFNYPIKGAEPVQSMTPYYDDIEDSYLQLARNSINGEIEKNKNLGIKNGYSFI
QFVNNVVNLNTTLKGNEQNGNSNGANNETEFDETNKNPWADINERIMFCPSKNIYTFVEN
MQEKDIIEYYKYKCDHLKKLINKNMEIYKKIENKYDIYTKGYQLKLKSYKKTFNANFNTY
INHLSEQEALYNLHEGEQIYALQRMQQEKEENKKELEYHKSLQNIYAELLATNEQLKNAE
GNK
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgaggattcagattaagggaggaatttggaaaaactgcgaagatgaagttctgaaagca
gctgttatgaaatatggattaaataactggtctcgtgttgcttctttacttgttcgaaaa
tcagcaaagcaatgtaaagcacgttggtatgaatggttggatccatctgttaagaaaacg
gaatggagcaaagaagaggaagaaaaactattacatctagcgaaactatttccaacccag
tggagaactattgctcccgtagttgggagaacagcacaacaatgtttagaacattatgaa
tatttattagatgaagctgaaggaaaagtttatgataaaaataaaaatcctaggcatttg
agaccaggtgaaattgatcctgctccggaaactcggcctgctcgtgctgatcctgttgat
atggatgatgaagaaaaagaaatgctagcagaagctaaagctagattagcaaatactaaa
gggaaaaaagctaaaagaaaagccagagaaaaacaattagaacaagcaagaagattagca
ttattgcaaaaaaaaagagaactaaaagcagctggtattgtttcaaataatcattataaa
aaaaatgataaaaataaaatcgatcatattaatgaaattttatttgaaaggaaaccatta
aaaggtttttacaatgtagaaaatgaacaaaatattgaagatcaatctcaatacagaaat
aaaaataataaagaccaaagcatatctggtgacagtaataacaaaataagaagcataaaa
tctatggatgtagaaaatataaataaattaactgacttggggcaagatgataataaacag
aataaaagaggtaaaaaaaataaaaacgaagagcatgaccttttaaatgctatcgaaaat
tatgataaacaatttaacgaattaagtcatctaagaaagcgagttcggttaaatttgcct
gaacccgttttaaatgaaaatgaattagatgaaattattcaaattaataaagaagcgaca
tcttttaatcaaataataaaggattataatgataataatctggcaaacggccctataaat
aatatattacctagtatcgctagtacaccatttgtgttaaatcaaggagatatgctatca
tctataggaacaaatttttacaatgataacaataagtcaataaaattttcaagcgtccta
gatcatagtatacaacaagcggctcaaagtataatatcgaacaatatgaacatgcccatc
ttgtatagaaatgaagaattcacaaaagattctcaaaaaaaaggacaatataataaaagt
tattttaaaaatgatgaaactatagaagaaggaaacatatttgatgatgataataataat
gcccttgatgatattagagaacgttcaaaaaaaattaaagaagaaattgaaaataaccaa
aataaaattaaaaatgaagaaaatatagcagaaaaccaaaggatatccgccaaaaataaa
attattagtgatataaaaagttttagaaaaaatataagtgcatatgcacaatctattata
tcatataaaggttttaaaaatgataactcgatgattaatcctagtgcattagtaaatgaa
aatatgattgatgaagatgatgataattatgaggaaagggtagatagagctaaattgctt
ataaagtcgtctttagcaaatttgccaaaagaaacaaatgttatcgaactacaaatgcca
gagaaagataatattccaaatgaagatggagaaattggtgtagagttagaagaagatgca
caagaggctgaaaaaaaaaaaaaaatggaagaaataaaaaaagaacaagataaatttaat
aaacaaaataaagttattcaatggaatttgccaagaccatgtttcttacaaaaaataaat
attttcaatgtgccaaatataaatataaatgaagaagaaaaattaatacaaaaagaatta
ttatctttgataaaaaatgatatgtttaattatcccattaaaggagctgagcctgtccaa
agtatgacaccatattatgacgatatagaagattcctatttacagctagctcgaaactct
atcaatggcgaaatcgaaaaaaataagaatcttggaattaaaaatgggtattcgtttatc
caatttgttaataatgtagtaaatcttaatactacgttaaaaggaaatgaacaaaatgga
aattcaaatggagcaaataatgaaactgaatttgatgaaacgaataaaaatccttgggct
gatataaatgaaagaattatgttttgcccttcaaaaaatatttatacatttgttgaaaat
atgcaagaaaaggacataatagaatactataaatacaaatgtgatcatttaaaaaaatta
attaataagaatatggagatatataaaaaaattgaaaataaatatgatatatatactaag
ggatatcaactaaaactaaaaagttacaaaaaaacgtttaatgctaattttaatacatat
attaatcatttgagcgaacaagaagctttatataatttgcatgaaggggaacaaatttat
gcattacagcgtatgcaacaagagaaggaagaaaataaaaaggagctagaatatcacaaa
tctttacaaaatatatatgctgagttgcttgccacaaatgaacaattgaaaaatgccgaa
ggaaataaataa

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