Plasmodium berghei: 55151748
Help
Entry
55151748 CDS
T01111
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6, putative
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pbe
Plasmodium berghei
Pathway
pbe03018
RNA degradation
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
55151748
09123 Folding, sorting and degradation
03018 RNA degradation
55151748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbe03019
]
55151748
03041 Spliceosome [BR:
pbe03041
]
55151748
Messenger RNA biogenesis [BR:
pbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
55151748
mRNA degradation factors
5'-3' decay
Lsm complex
55151748
Spliceosome [BR:
pbe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
55151748
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
55151748
NCBI-ProteinID:
XP_034423558
UniProt:
A0A509AP38
LinkDB
All DBs
Position
13:complement(<1575349..>1575582)
Genome browser
AA seq
77 aa
AA seq
DB search
MSSNSPKYFVQSLKGRTVIVRLNNGADYKGILACLDERMNVTLEQTEEYFDGELIEKYND
AFIRGNNVFYIRAIDDE
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaattctccgaaatatttcgttcaaagcttaaaaggacgaactgtaatagta
agactaaataacggagcagattataaaggcatattagcatgcttagatgagcgtatgaat
gttacattagaacaaactgaagaatattttgatggcgaactaattgaaaaatataacgac
gcttttattagaggaaacaatgttttttatataagagcaattgatgatgaataa
DBGET
integrated database retrieval system
