Plasmodium berghei: 55151823
Help
Entry
55151823 CDS
T01111
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 1, putative
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
55151823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbe03400
]
55151823
Enzymes [BR:
pbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
55151823
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
55151823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
55151823
NCBI-ProteinID:
XP_034423631
LinkDB
All DBs
Position
13:complement(<1839721..>1841250)
Genome browser
AA seq
509 aa
AA seq
DB search
MPRHCCCFVFHFLLYMLLINIVKNNIITAFSHRHQALRERKNIFSNSPINYIYYLGANKH
IYSKFSSVCEQKKLAHKKIAIKKWGIERNEKKKFTISLNNYNKIQQSKFMSKMVKENKAS
TKNENKCSINNTQDIRNFMNLKKEEKDEECDEKTKQDNNKENIKNETIVQKKKIDKNNKT
KEKIKTKSETNKNTNITYPSIPKSIEKRWADYKKIIEYAKSTNVYLGAHISASGGVQNAP
INSFNVSGLAFALFLKNQRKWESPPLTEENIKQFNENCKKYNFDKNLILPHGSYLINLAN
PDKEKREKSYLSFVDDIKRCEQLNIKLYNFHPGSTVGMCSTEQGIKNISDCINRAHKETS
NVIIVLENSAGQKNSIGSKFEHLRDIISQIDDKERIGVCLDTCHTFAAGYDIKSYEKFEE
VMNNFHNIVDSKYLKAVHLNDSKSDLGSGLDRHENIGKGKLTLDTFKYIMTSKYFKNIPI
VLETPDITNDESVYKYEIEYLYKMCAKEQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcattgttgctgctttgtttttcactttttgttgtatatgttactaattaat
atcgttaaaaataatataattacagccttttcacacaggcatcaagcattaagagaaaga
aaaaacatcttttcaaacagccccataaattatatatattatttaggagcaaataaacat
atttattccaaattttcatcagtttgtgaacagaaaaagctagcacataaaaaaatagct
ataaaaaagtgggggatagaaaggaatgaaaaaaaaaaatttacaataagtctaaacaat
tataataaaatacagcaaagtaaatttatgagcaaaatggtaaaagaaaataaagccagt
acaaaaaacgaaaacaaatgttcaataaataatacccaagatatcagaaattttatgaat
ctcaaaaaggaggaaaaggatgaagaatgtgacgaaaaaacaaagcaggataataataaa
gaaaatataaaaaacgaaacaattgttcagaaaaaaaaaatcgataaaaataataagaca
aaggaaaaaataaaaacgaaatcagaaacgaataaaaacactaatataacatatcctagt
atacccaaaagtattgaaaagagatgggcagattataaaaaaattatagaatatgcaaaa
agtacaaacgtttatttgggagcacatatatccgcttcagggggagtacaaaatgcccca
ataaactcatttaatgtatcaggattggcatttgcattatttttgaaaaaccaaagaaaa
tgggaaagtccaccattaactgaagaaaatataaaacagtttaacgaaaattgtaaaaaa
tataattttgataaaaatttaattttaccacatgggtcgtatcttataaacctagcaaat
cctgataaagaaaaaagagaaaaatcatatttatcatttgtagatgatataaaaagatgt
gaacaattaaatattaaattatataattttcatccaggttcaactgttggaatgtgctca
acagaacaaggaataaaaaatatttctgattgtataaatagagcccataaagaaacatca
aatgttattatagttttagaaaattccgcaggccaaaaaaattcaattggttcaaaattt
gagcatttacgtgatataatatctcaaattgatgataaagaaagaataggtgtttgttta
gatacatgccatacatttgcagcagggtatgatataaaatcatatgaaaaatttgaagaa
gttatgaataattttcataatattgtagattctaaatatttaaaagctgtacatttaaat
gattcaaaatcggatttaggaagtggattggatagacatgaaaatattggaaaaggaaag
ttaacattagatacatttaaatatattatgacatcaaagtatttcaaaaacattccaatt
gttttagaaacacctgatataacaaacgatgaatctgtatacaagtatgaaattgaatat
ttgtacaagatgtgtgcaaaggagcaatag
DBGET
integrated database retrieval system
