Plasmodium berghei: PBANKA_0203000
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Entry
PBANKA_0203000 CDS
T01111
Name
(RefSeq) chromatin assembly factor 1 protein WD40 domain, putative
KO
K10752
histone-binding protein RBBP4
Organism
pbe
Plasmodium berghei
Pathway
pbe03082
ATP-dependent chromatin remodeling
pbe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PBANKA_0203000
03083 Polycomb repressive complex
PBANKA_0203000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_0203000
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PBANKA_0203000
Histone modification proteins
HAT complexes
HATB complex
PBANKA_0203000
HDAC complexes
Sin3A-HDAC complex
PBANKA_0203000
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PBANKA_0203000
PRC2.2
PBANKA_0203000
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PBANKA_0203000
Heterochromatin formation proteins
Other heterochromatin formation proteins
PBANKA_0203000
Chromatin remodeling factors
NuRD complex
PBANKA_0203000
NuRF complex
PBANKA_0203000
NuRF complex (fruit fly)
PBANKA_0203000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
MIOS_WD40
WDR54
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_VPS8
WD_LRWD1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
55147784
NCBI-ProteinID:
XP_034419756
UniProt:
A0A509ADC9
LinkDB
All DBs
Position
2:115741..117081
Genome browser
AA seq
446 aa
AA seq
DB search
MNALKECKKRKSNALDEACLELSEEPTNEEIMKEEVENVETQFANWKTNSGLLYDFVCRK
ELEWPSLSMDFGDYSDENIKDNVLNQIVCVGTHTSNNEPNYLYVCDVLFPLEQLPQDKCV
YKINESYEGFDFCPEKNKITIKSKIYHEGEVNRIRFLPLEKKHIVVTKAIDGNLHLFDIN
KHSIDDTTNSDSRKMSPEISFIGNNSDGFGLEFNSLKKYALTCGNDGSINVYDYNDLSAK
SLNPFYSVKYKSPINDVSPTNDPNLILACADDGYILMYDLRIKTTEPAQQVLGQQVPVNA
ISLNTFTGHFASGSDNGKIKVWDIKKFNEPAHIINAHKEAIIRLNFSPNDSSILASASNN
RFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPITDFNWNHHKKLKMFIGSTAEDN
TLQFWQLKTELLDEENTVSTSNTDVE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccttaaagagtgtaaaaaaagaaaatctaacgcattagacgaagcttgctta
gaattaagtgaagaaccaactaatgaagaaataatgaaagaagaagtcgaaaatgttgaa
actcaatttgcaaattggaaaacaaacagtgggttattatatgattttgtttgtagaaaa
gaattagaatggccatcattgtcaatggattttggtgattatagtgacgaaaatatcaaa
gataatgttttaaatcaaatagtatgtgtaggaacccatacatctaataatgaacccaat
tatttatatgtgtgtgatgttttattcccacttgagcaattgccacaagataaatgtgtt
tacaaaataaatgaaagctatgaaggttttgatttttgtccagaaaaaaataaaattaca
attaaatcaaaaatatatcatgaaggagaagtaaatcgaatccgatttttacctttagaa
aaaaaacacattgttgttactaaagcaattgatggaaatttacatctatttgatataaat
aaacatagtattgatgataccacaaatagtgattcaagaaaaatgagcccagaaatatca
ttcattggtaataattcagatggttttggacttgaatttaatagtctaaaaaaatatgca
ttaacttgtggtaatgatggaagcataaatgtatatgactataatgatttgagtgcaaaa
tctttgaacccattttattcagtaaaatataagtcaccaattaatgatgtttctccaaca
aatgatccaaatttaatattagcatgtgcagatgatggttatattttaatgtatgatctt
agaattaaaactacagaacccgctcaacaagttttaggtcaacaagttcctgtcaatgct
atttctttgaatacatttactggacattttgcatctggaagtgataatggaaaaattaaa
gtatgggatattaaaaagttcaatgagcctgcacatatcatcaatgcacacaaagaagct
attatcagattaaacttttctccaaatgattcttctatacttgcatctgcaagtaataat
cgttttattaatgtttacgatctaaataaaatcggtgaagagttagatgcaatcgacttg
tctgatggtccatctgaactcattttttcacatggtggtcatacacaacctataacagat
tttaattggaatcatcacaaaaaattaaaaatgttcataggttcaacagcagaggataat
accttacaattttggcaattaaaaaccgaattacttgacgaggaaaataccgtttctaca
tctaacacagatgtagaataa
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