KEGG   Plasmodium berghei: PBANKA_0303200
Entry
PBANKA_0303200    CDS       T01111                                 
Name
(RefSeq) DNA-directed RNA polymerase II 16 kDa subunit, putative
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pbe  Plasmodium berghei
Pathway
pbe03020  RNA polymerase
pbe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PBANKA_0303200
  09124 Replication and repair
   03420 Nucleotide excision repair
    PBANKA_0303200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbe03021]
    PBANKA_0303200
   03400 DNA repair and recombination proteins [BR:pbe03400]
    PBANKA_0303200
Transcription machinery [BR:pbe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PBANKA_0303200
DNA repair and recombination proteins [BR:pbe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PBANKA_0303200
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 55147955
NCBI-ProteinID: XP_034419916
UniProt: A0A509AE25
LinkDB
Position
3:complement(97434..97988)
AA seq 133 aa
MANNNSHGNIQDLNLGPEFQNCKCLNLCELQLILGDQLRLTSKRNEDAQALIRSSFDYAN
RFATIKNRSSIVDIRTNLERIGELYEYEIAMLVNLLPKTILEARYFIPSLIRLNEETLHS
ILEHLISYKMYVS
NT seq 402 nt   +upstreamnt  +downstreamnt
atggcaaataacaactcacatggcaatattcaagatttaaaccttggcccagaatttcaa
aattgcaaatgcttaaacttgtgtgaattacaactaattttgggcgatcaattaaggctg
acctcgaaaagaaacgaagatgctcaagcacttataagatcatcctttgattatgcaaac
agatttgcaacaataaaaaatagaagctcaatagttgatattagaacaaacttagaaaga
atcggtgagttatatgaatatgaaatagctatgctagtaaacttattacctaaaactatt
ttagaggccagatattttattccatctttaattcgattaaatgaagaaacattgcattca
atattagagcatcttataagttacaaaatgtatgtatcataa

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