Plasmodium berghei: PBANKA_0312700
Help
Entry
PBANKA_0312700 CDS
T01111
Name
(RefSeq) DEAD/DEAH box helicase, putative
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pbe
Plasmodium berghei
Pathway
pbe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PBANKA_0312700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_0312700
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_0312700
Transcription machinery [BR:
pbe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PBANKA_0312700
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
PBANKA_0312700
Chromatin remodeling factors
BAF complex
PBANKA_0312700
PBAF complex
PBANKA_0312700
GBAF(ncBAF) complex
PBANKA_0312700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
55148049
NCBI-ProteinID:
XP_034420010
UniProt:
A0A509AFE0
LinkDB
All DBs
Position
3:440439..444836
Genome browser
AA seq
1465 aa
AA seq
DB search
MIRNCDAGSLEENSTNYNIDICQNNEKKNFLNQDIQENFKNLENININNKNEVDKYDKIN
IIGKSKMSKSSHRIETNINHKIEKDNELDVSKYIHLSEHLQIRKDKQISMSAALNKYIND
NINFIRSFGNNNKHLEKYPKNILNQFVDIGVKIRFLLYRDKIKKYKKSKKIVEKNADLEK
DGKYKYCNIPSQTIPNLYEQDSNNSDSSCLLSDSSSNNDKKIVKNVNIKDCRNLNELTID
KDELNNFKHLEKNKNAYFRYIDSIYTKYAMINNMSISYFQNIQNIINKNSSDTNITDKVE
NEMNNIRKFFSNQENAKAIERNQNILRTDIINAMFGFNIISDTQCMKIPIKYVNSEYKEK
EKKKLIKNDTIYENESISKNSDKEQHPFLSKLRNVKKEKKKMSTQNQDKNNYIKKKLDNA
IDVNKKNKICEYIYELQKKNYKMNRKIKSLKQFILLDNWKGFKNHNIYINMIDQEKKENE
KLFATLCYEQMSYINEKKQIILKREEKERLKLLRENNMDEYIKLIKNVKNKRIQEMLDIT
DKFLNNMSHSVLYQKGKTDVIISDFTKESINMRKKYYDVAHTIKNKILKQPSILIGGSLM
QYQLDGLEWLVSLHNNNLNGILADEMGLGKTVQTISLFAYLKELKMCNIKNENNKNCETN
NSSEIYNQIGKNIIIVPLSTLPNWINEFEKWCPTLKVITYKGNKNERKDINKILLENNYD
ICLTTFDIIIKEKNILGKISWNYIIIDEGHRIKNDNSKLHSILSLFISKYRILLTGTPLQ
NNMKELWALLNFLLPKIFSSSTDFEKWFSFPLYNEKNVYEIMTEEEELLIINRLHTILLP
FMLRRLKKDVLEFLPKKYEYNIYVQLSLYQKVLYKQIENKSFKQVNSDGTLNTKSFQNTI
MQLRKVVNHPFLFTYNYDINDFIIKSSGKFEVLDRMIPKLLKFKHKILLFCQMTKLMDIL
SDYFELRGYKYHRLDGSVSLSNRREIIDNFNESMFVNNSEEIFKNKDSDLLTQESKLDEP
MIFILSTRSGSLGLNLQAADTVIIFDSDFNPHQDIQAMCRCHRIGQKNIVKVFRFITISS
VEELVFQKAKDKLNINDKVIQAGLFNKIYNDNDRQKKLKNIIQKNQKYDPNLYPTNPIML
NEYMSRNPEELEYFLNFDREYFGEDLFSLLQSIRQKETQKSQFRYMSEDEIDEEKEKDEV
DRVNDLGSDRVNDLGSDRVNDLGSDRVNDLGSDRVNETSVADEIERILIKSKKLICESDL
PVHLFCEDIVETNEINFKRTRKVINSNLMYEEELTEDQFCKLIDPTPSQICSQNNIEYST
DIQDCMENEQTHKFELLEKETIDIELQDNNKKQKQIIKNEISEYIDNEDFTLNKTRSGIP
NIENNYLEKNQRKDELENQNKQTDVEKEENVIRKRKGEEINISNFEKKYSEFSEPSNILS
VSTKLQENEKKNKNKKRKKNSEDEI
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaattgcgatgcaggaagtttagaggaaaattctacaaattataacattgac
atttgccaaaacaatgaaaaaaaaaattttttgaatcaagatatacaagaaaacttcaaa
aacttggaaaatattaatataaataataaaaatgaagtagacaaatatgataaaataaat
attattggaaaaagtaaaatgagcaaatcttcacacagaattgaaacaaatataaatcat
aaaatagaaaaagacaatgaattggacgtgtctaaatatatccatttaagtgagcattta
caaatacgaaaagataaacaaatttctatgagtgcagcgttaaataaatatataaatgat
aacataaattttattagaagttttggaaataacaataaacatttggaaaaatacccaaaa
aatatattaaatcaatttgttgatataggagtaaaaataagatttttactttatagagat
aaaattaaaaaatataaaaaatcaaaaaaaatagttgaaaaaaatgcagatttagaaaaa
gatggtaaatataaatattgtaatataccaagccaaactattccaaatttatatgaacaa
gattcaaacaattcagatagtagctgtctattatcggattcttctagtaataatgataaa
aaaatagtgaaaaatgtaaatattaaagattgtcgaaatttaaacgaattaacaattgat
aaggatgaattgaataattttaaacatttagaaaaaaataaaaatgcatattttcgatat
atagatagtatatatacaaaatacgcaatgattaataatatgagcatttcatattttcaa
aatattcaaaatattataaataaaaatagttcagatacgaatataacagataaggtggaa
aacgaaatgaataatattagaaagtttttttcaaatcaagaaaatgctaaagcaattgaa
agaaatcaaaacatattaagaactgatattataaatgcaatgtttggttttaacataata
agtgatacccaatgtatgaaaatacctatcaaatatgtaaatagtgaatataaagaaaaa
gaaaaaaaaaaattaataaaaaatgatactatatatgaaaatgaatcaatttcaaaaaac
agtgataaagaacaacatccattcttgtcaaagcttagaaatgtaaaaaaagaaaaaaaa
aaaatgagcacacaaaatcaagataaaaataattatataaaaaaaaaattagataatgct
attgatgtaaataagaaaaataaaatatgtgaatacatatatgagttacaaaaaaaaaat
tataaaatgaatagaaaaataaaaagtttaaaacaatttatattattagacaactggaaa
ggttttaaaaatcataatatatatataaatatgatagatcaagaaaaaaaagaaaatgaa
aaattatttgcaaccttatgttatgagcaaatgagttatataaatgaaaaaaaacaaatt
atattaaaaagagaagaaaaagaaagattaaaattattaagggaaaataatatggatgaa
tatatcaaattaataaaaaatgtgaaaaataaaagaatacaagaaatgttagatataaca
gataaatttcttaataatatgtcacattctgtattatatcaaaaaggaaaaacagatgtt
attatttctgattttacaaaagaatctataaatatgagaaaaaaatattatgatgttgca
catacaattaaaaataaaattctaaaacaaccatctatattaattggagggagtttaatg
caatatcaattagacggattagaatggctagtttctttacataataataatttaaatgga
atattagcagatgaaatgggattagggaaaactgtacaaacaataagtttatttgcttat
cttaaagagttaaaaatgtgtaatataaaaaacgaaaataacaaaaattgtgaaactaat
aattcttctgaaatatataatcaaattggaaaaaatataattattgtcccattatctact
ttaccaaattggataaatgaatttgagaaatggtgcccaactttaaaagttataacttat
aaaggaaataaaaatgaaagaaaagatattaacaaaatattattagaaaataattatgat
atatgtttaactacatttgatattataattaaagagaaaaatatattaggaaagatatcg
tggaattatataataatagatgaagggcatagaataaaaaatgataattctaaacttcat
tctattctatcattatttatcagtaaatatcgtatattattaacaggtactcctttacaa
aataatatgaaagaattgtgggctcttttaaattttttacttccaaaaatattttcttca
tctacagattttgaaaaatggttttcatttccattatataatgaaaaaaatgtatatgaa
attatgacagaagaagaagaactacttattattaatagattgcatactatccttttacct
tttatgcttagacgtttgaaaaaagatgtattagaatttctgcccaaaaaatatgaatat
aatatatatgtacaattatcattatatcagaaagtattatataaacaaatagaaaataaa
agttttaaacaagttaattcagatggtacattaaatacaaaatcatttcaaaatacgatt
atgcaattgcgtaaggttgttaatcatccatttttatttacatataattatgacattaat
gattttataattaaatcgagtggtaaatttgaagtattagatagaatgatacctaaatta
ttaaaattcaaacataaaatcttattattttgtcaaatgacaaaactaatggatatactt
tctgattattttgaacttcgaggatataaatatcatagacttgatggtagtgttagttta
tcaaatcgtagagaaattatagataattttaatgaatcaatgtttgtaaataattctgaa
gaaatatttaaaaataaagattcagatttattaactcaagaatctaaattagatgaacct
atgatatttatattgtctacaagatctggaagtttgggactaaatttacaagcagcagat
actgtaattatatttgatagcgattttaatccacatcaagatatacaagcaatgtgtaga
tgccatagaatagggcaaaaaaatattgtaaaagttttccgatttatcactatttcaagt
gtagaagaattagtttttcaaaaagcaaaagataaactcaatataaatgataaagttata
caagcagggttatttaataaaatatataatgataatgatagacaaaaaaaattaaaaaat
attattcaaaaaaatcaaaaatatgaccccaatttatacccaactaatcctatcatgctc
aatgaatatatgagtcgaaacccagaggaactcgaatattttctcaattttgacagggaa
tattttggagaggatctattttcacttttgcaatccattcgtcagaaggaaacacaaaag
tcgcagtttcgatacatgagcgaggatgaaattgacgaggaaaaggaaaaagacgaggtt
gaccgagttaacgatttgggttctgaccgagttaacgatttgggttctgaccgagttaac
gatttgggttctgaccgagttaatgatttgggttctgaccgagttaatgaaacaagtgtg
gctgacgaaatcgaacgaatcctaataaaatcgaagaagttaatatgcgagtcagatttg
ccagttcatttattttgtgaggacattgttgaaacaaatgaaataaattttaagagaacg
cgaaaagtaattaattctaatcttatgtatgaagaagaactaacagaggatcagttttgt
aaactaatagatccaactccttctcaaatttgctctcaaaataatatagagtattctact
gatattcaagattgtatggaaaatgaacaaactcacaagtttgaacttttagaaaaagaa
acaattgatatcgaacttcaagataataataagaaacagaaacaaatcataaaaaatgaa
atatctgaatatatagataatgaagatttcacattaaataaaacaagaagcggcatacca
aatatagaaaataattacctcgaaaaaaatcaaagaaaagatgaattggaaaatcagaac
aaacaaactgatgtagaaaaagaagaaaatgttattagaaaacgaaagggtgaggaaata
aatatcagcaattttgaaaaaaaatattcagagttttctgaaccatctaatatattaagt
gtttcaacaaaattacaagaaaatgaaaaaaaaaataaaaacaaaaaaaggaaaaaaaat
agtgaggatgaaatctaa
DBGET
integrated database retrieval system