KEGG   Plasmodium berghei: PBANKA_0312700
Entry
PBANKA_0312700    CDS       T01111                                 
Name
(RefSeq) DEAD/DEAH box helicase, putative
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pbe  Plasmodium berghei
Pathway
pbe03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pbe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PBANKA_0312700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbe03021]
    PBANKA_0312700
   03036 Chromosome and associated proteins [BR:pbe03036]
    PBANKA_0312700
Transcription machinery [BR:pbe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     PBANKA_0312700
Chromosome and associated proteins [BR:pbe03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     PBANKA_0312700
  Chromatin remodeling factors
   BAF complex
    PBANKA_0312700
   PBAF complex
    PBANKA_0312700
   GBAF(ncBAF) complex
    PBANKA_0312700
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD
Other DBs
NCBI-GeneID: 55148049
NCBI-ProteinID: XP_034420010
UniProt: A0A509AFE0
LinkDB
Position
3:440439..444836
AA seq 1465 aa
MIRNCDAGSLEENSTNYNIDICQNNEKKNFLNQDIQENFKNLENININNKNEVDKYDKIN
IIGKSKMSKSSHRIETNINHKIEKDNELDVSKYIHLSEHLQIRKDKQISMSAALNKYIND
NINFIRSFGNNNKHLEKYPKNILNQFVDIGVKIRFLLYRDKIKKYKKSKKIVEKNADLEK
DGKYKYCNIPSQTIPNLYEQDSNNSDSSCLLSDSSSNNDKKIVKNVNIKDCRNLNELTID
KDELNNFKHLEKNKNAYFRYIDSIYTKYAMINNMSISYFQNIQNIINKNSSDTNITDKVE
NEMNNIRKFFSNQENAKAIERNQNILRTDIINAMFGFNIISDTQCMKIPIKYVNSEYKEK
EKKKLIKNDTIYENESISKNSDKEQHPFLSKLRNVKKEKKKMSTQNQDKNNYIKKKLDNA
IDVNKKNKICEYIYELQKKNYKMNRKIKSLKQFILLDNWKGFKNHNIYINMIDQEKKENE
KLFATLCYEQMSYINEKKQIILKREEKERLKLLRENNMDEYIKLIKNVKNKRIQEMLDIT
DKFLNNMSHSVLYQKGKTDVIISDFTKESINMRKKYYDVAHTIKNKILKQPSILIGGSLM
QYQLDGLEWLVSLHNNNLNGILADEMGLGKTVQTISLFAYLKELKMCNIKNENNKNCETN
NSSEIYNQIGKNIIIVPLSTLPNWINEFEKWCPTLKVITYKGNKNERKDINKILLENNYD
ICLTTFDIIIKEKNILGKISWNYIIIDEGHRIKNDNSKLHSILSLFISKYRILLTGTPLQ
NNMKELWALLNFLLPKIFSSSTDFEKWFSFPLYNEKNVYEIMTEEEELLIINRLHTILLP
FMLRRLKKDVLEFLPKKYEYNIYVQLSLYQKVLYKQIENKSFKQVNSDGTLNTKSFQNTI
MQLRKVVNHPFLFTYNYDINDFIIKSSGKFEVLDRMIPKLLKFKHKILLFCQMTKLMDIL
SDYFELRGYKYHRLDGSVSLSNRREIIDNFNESMFVNNSEEIFKNKDSDLLTQESKLDEP
MIFILSTRSGSLGLNLQAADTVIIFDSDFNPHQDIQAMCRCHRIGQKNIVKVFRFITISS
VEELVFQKAKDKLNINDKVIQAGLFNKIYNDNDRQKKLKNIIQKNQKYDPNLYPTNPIML
NEYMSRNPEELEYFLNFDREYFGEDLFSLLQSIRQKETQKSQFRYMSEDEIDEEKEKDEV
DRVNDLGSDRVNDLGSDRVNDLGSDRVNDLGSDRVNETSVADEIERILIKSKKLICESDL
PVHLFCEDIVETNEINFKRTRKVINSNLMYEEELTEDQFCKLIDPTPSQICSQNNIEYST
DIQDCMENEQTHKFELLEKETIDIELQDNNKKQKQIIKNEISEYIDNEDFTLNKTRSGIP
NIENNYLEKNQRKDELENQNKQTDVEKEENVIRKRKGEEINISNFEKKYSEFSEPSNILS
VSTKLQENEKKNKNKKRKKNSEDEI
NT seq 4398 nt   +upstreamnt  +downstreamnt
atgatcagaaattgcgatgcaggaagtttagaggaaaattctacaaattataacattgac
atttgccaaaacaatgaaaaaaaaaattttttgaatcaagatatacaagaaaacttcaaa
aacttggaaaatattaatataaataataaaaatgaagtagacaaatatgataaaataaat
attattggaaaaagtaaaatgagcaaatcttcacacagaattgaaacaaatataaatcat
aaaatagaaaaagacaatgaattggacgtgtctaaatatatccatttaagtgagcattta
caaatacgaaaagataaacaaatttctatgagtgcagcgttaaataaatatataaatgat
aacataaattttattagaagttttggaaataacaataaacatttggaaaaatacccaaaa
aatatattaaatcaatttgttgatataggagtaaaaataagatttttactttatagagat
aaaattaaaaaatataaaaaatcaaaaaaaatagttgaaaaaaatgcagatttagaaaaa
gatggtaaatataaatattgtaatataccaagccaaactattccaaatttatatgaacaa
gattcaaacaattcagatagtagctgtctattatcggattcttctagtaataatgataaa
aaaatagtgaaaaatgtaaatattaaagattgtcgaaatttaaacgaattaacaattgat
aaggatgaattgaataattttaaacatttagaaaaaaataaaaatgcatattttcgatat
atagatagtatatatacaaaatacgcaatgattaataatatgagcatttcatattttcaa
aatattcaaaatattataaataaaaatagttcagatacgaatataacagataaggtggaa
aacgaaatgaataatattagaaagtttttttcaaatcaagaaaatgctaaagcaattgaa
agaaatcaaaacatattaagaactgatattataaatgcaatgtttggttttaacataata
agtgatacccaatgtatgaaaatacctatcaaatatgtaaatagtgaatataaagaaaaa
gaaaaaaaaaaattaataaaaaatgatactatatatgaaaatgaatcaatttcaaaaaac
agtgataaagaacaacatccattcttgtcaaagcttagaaatgtaaaaaaagaaaaaaaa
aaaatgagcacacaaaatcaagataaaaataattatataaaaaaaaaattagataatgct
attgatgtaaataagaaaaataaaatatgtgaatacatatatgagttacaaaaaaaaaat
tataaaatgaatagaaaaataaaaagtttaaaacaatttatattattagacaactggaaa
ggttttaaaaatcataatatatatataaatatgatagatcaagaaaaaaaagaaaatgaa
aaattatttgcaaccttatgttatgagcaaatgagttatataaatgaaaaaaaacaaatt
atattaaaaagagaagaaaaagaaagattaaaattattaagggaaaataatatggatgaa
tatatcaaattaataaaaaatgtgaaaaataaaagaatacaagaaatgttagatataaca
gataaatttcttaataatatgtcacattctgtattatatcaaaaaggaaaaacagatgtt
attatttctgattttacaaaagaatctataaatatgagaaaaaaatattatgatgttgca
catacaattaaaaataaaattctaaaacaaccatctatattaattggagggagtttaatg
caatatcaattagacggattagaatggctagtttctttacataataataatttaaatgga
atattagcagatgaaatgggattagggaaaactgtacaaacaataagtttatttgcttat
cttaaagagttaaaaatgtgtaatataaaaaacgaaaataacaaaaattgtgaaactaat
aattcttctgaaatatataatcaaattggaaaaaatataattattgtcccattatctact
ttaccaaattggataaatgaatttgagaaatggtgcccaactttaaaagttataacttat
aaaggaaataaaaatgaaagaaaagatattaacaaaatattattagaaaataattatgat
atatgtttaactacatttgatattataattaaagagaaaaatatattaggaaagatatcg
tggaattatataataatagatgaagggcatagaataaaaaatgataattctaaacttcat
tctattctatcattatttatcagtaaatatcgtatattattaacaggtactcctttacaa
aataatatgaaagaattgtgggctcttttaaattttttacttccaaaaatattttcttca
tctacagattttgaaaaatggttttcatttccattatataatgaaaaaaatgtatatgaa
attatgacagaagaagaagaactacttattattaatagattgcatactatccttttacct
tttatgcttagacgtttgaaaaaagatgtattagaatttctgcccaaaaaatatgaatat
aatatatatgtacaattatcattatatcagaaagtattatataaacaaatagaaaataaa
agttttaaacaagttaattcagatggtacattaaatacaaaatcatttcaaaatacgatt
atgcaattgcgtaaggttgttaatcatccatttttatttacatataattatgacattaat
gattttataattaaatcgagtggtaaatttgaagtattagatagaatgatacctaaatta
ttaaaattcaaacataaaatcttattattttgtcaaatgacaaaactaatggatatactt
tctgattattttgaacttcgaggatataaatatcatagacttgatggtagtgttagttta
tcaaatcgtagagaaattatagataattttaatgaatcaatgtttgtaaataattctgaa
gaaatatttaaaaataaagattcagatttattaactcaagaatctaaattagatgaacct
atgatatttatattgtctacaagatctggaagtttgggactaaatttacaagcagcagat
actgtaattatatttgatagcgattttaatccacatcaagatatacaagcaatgtgtaga
tgccatagaatagggcaaaaaaatattgtaaaagttttccgatttatcactatttcaagt
gtagaagaattagtttttcaaaaagcaaaagataaactcaatataaatgataaagttata
caagcagggttatttaataaaatatataatgataatgatagacaaaaaaaattaaaaaat
attattcaaaaaaatcaaaaatatgaccccaatttatacccaactaatcctatcatgctc
aatgaatatatgagtcgaaacccagaggaactcgaatattttctcaattttgacagggaa
tattttggagaggatctattttcacttttgcaatccattcgtcagaaggaaacacaaaag
tcgcagtttcgatacatgagcgaggatgaaattgacgaggaaaaggaaaaagacgaggtt
gaccgagttaacgatttgggttctgaccgagttaacgatttgggttctgaccgagttaac
gatttgggttctgaccgagttaatgatttgggttctgaccgagttaatgaaacaagtgtg
gctgacgaaatcgaacgaatcctaataaaatcgaagaagttaatatgcgagtcagatttg
ccagttcatttattttgtgaggacattgttgaaacaaatgaaataaattttaagagaacg
cgaaaagtaattaattctaatcttatgtatgaagaagaactaacagaggatcagttttgt
aaactaatagatccaactccttctcaaatttgctctcaaaataatatagagtattctact
gatattcaagattgtatggaaaatgaacaaactcacaagtttgaacttttagaaaaagaa
acaattgatatcgaacttcaagataataataagaaacagaaacaaatcataaaaaatgaa
atatctgaatatatagataatgaagatttcacattaaataaaacaagaagcggcatacca
aatatagaaaataattacctcgaaaaaaatcaaagaaaagatgaattggaaaatcagaac
aaacaaactgatgtagaaaaagaagaaaatgttattagaaaacgaaagggtgaggaaata
aatatcagcaattttgaaaaaaaatattcagagttttctgaaccatctaatatattaagt
gtttcaacaaaattacaagaaaatgaaaaaaaaaataaaaacaaaaaaaggaaaaaaaat
agtgaggatgaaatctaa

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