Plasmodium berghei: PBANKA_0316000
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Entry
PBANKA_0316000 CDS
T01111
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pbe
Plasmodium berghei
Pathway
pbe03030
DNA replication
pbe03410
Base excision repair
pbe03420
Nucleotide excision repair
pbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBANKA_0316000
03410 Base excision repair
PBANKA_0316000
03420 Nucleotide excision repair
PBANKA_0316000
03430 Mismatch repair
PBANKA_0316000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_0316000
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_0316000
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PBANKA_0316000
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PBANKA_0316000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_assoc_2
RCF1-5-like_lid
AAA_30
AAA_14
PTCB-BRCT
DNAX_ATPase_lid
RuvB_N
BRCT_2
AAA_22
Sigma54_activ_2
nSTAND3
AAA_18
AAA_19
AAA_16
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
55148085
NCBI-ProteinID:
XP_034420042
UniProt:
A0A509AF53
LinkDB
All DBs
Position
3:complement(546414..548999)
Genome browser
AA seq
861 aa
AA seq
DB search
MRSKEKKLFSDNSSDEGRKKKRLKKISNNLFENEDQNVLNNSDAKIVVEIKDESDDELAK
DASTTNNTTNKTIEKNSSKKNAYYDISSYFKPVSKNTPKEQTGNNSNINNQSKKIPLENV
DEYFNIIETGSKKVTTNPKRERSHDSDILEQNRYKKKYVFTEDNIILQKNETNVSQNFDY
LPFINKKFVLTGVFKTYNRDDLQNKIKEHGGSVMSAVSSKTHYLIHGEYLEDGRLYNEGK
KYQKAYELSKQSKSIIKILNEEELLELLPKQKNENSQNYQSNTEQNHHILNQNMKNEQEQ
EQNVSHVLNQLWVDKYKPTKIEDLVGNTQNVFKLKTWLSSWDDVCIKGLKKQVTKTFRGN
FENVNAKCALLSGPAGIGKTTTAKIVSTSSGYNVIEFNASDERNKAAVEKIGDMATGGYS
ITSLNNKNLKKTCIIMDEVDGMSSGDKGGSSAILKLIEKTKCPIICICNDRQNSKMRTLA
NKCYDLKFTTPNKNSVVKRLLEICKKENIMMEPNALELLWESSNGDIRQILNALQLLSKT
YKRIQFLDIKKDINNSNKNVQSLANPFEITLKLLNFHESSKLKIREIMDLFFVDYELIPY
FISENYTNIFNDNDNSPNSMNKWNTFAQISYDLSLAEKIKYNLKTTMDYSLLPHFSILSC
VCPVMRIRSLKSFMQGRINFPSAFGKISTFNKNKRLLNELCFNLSYKLNVYPKYMITSGF
LNYIYYKIIVPLQKNNVNDSIQLMEQYNITKEMLIENIPSLRLPIQENLYDKLDSKIKAS
FTRQYNATHVVKNDPNAVKKSLKSIDKKSYKNNDDEIDEDMDDLSDSKEDKDDDVLVKTK
PDKKNTTKNKLTTKPKTSKKK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaaaagaaaaaaaattatttagtgataatagtagtgatgagggaaggaaaaaa
aaacgtttgaaaaaaatctcaaataatttatttgaaaatgaggatcaaaatgtcttgaat
aattcagatgcaaaaattgttgttgaaattaaagatgaaagtgatgatgaactagcaaag
gatgcttctactactaataatacaacaaacaaaaccattgagaaaaattcctcaaaaaaa
aatgcgtattatgatatatcttcatattttaaaccagtttctaaaaatacaccaaaagag
caaactggaaataattccaacatcaataaccaaagcaaaaaaatccccctcgaaaatgtt
gatgaatattttaatattatagaaacaggatctaaaaaagtaacaactaatccaaaacga
gaaagaagtcatgattctgatattttagaacaaaatagatacaaaaaaaaatatgtattc
actgaagataacattattttacaaaaaaatgaaactaacgtttctcaaaattttgattat
ttaccttttataaataaaaagtttgtccttacaggtgttttcaaaacatataatagagat
gatttacaaaataaaattaaagaacatggaggaagtgtaatgtctgctgtatcatcaaaa
acacattatcttatacatggtgaatatttagaagatggtagattatataatgaagggaaa
aaatatcaaaaggcttatgaactttcaaaacaatctaaatctataattaaaatattaaat
gaagaagaattactagaacttcttccaaaacaaaaaaatgaaaattcacaaaattaccaa
agtaatactgagcaaaaccatcatatattaaaccaaaatatgaaaaatgaacaagaacaa
gaacaaaatgtatcacatgtcttaaatcaattatgggtcgataaatataaacctactaaa
atagaagatttagtaggaaatactcagaatgtttttaaattaaaaacatggctatcaagt
tgggatgatgtatgtataaaaggattaaaaaaacaagttactaaaacttttagaggaaat
tttgaaaatgtaaatgcaaaatgtgcgttattaagcggccctgctggaataggaaaaaca
actactgcaaaaattgtttcaacaagttcaggatataatgttatagaatttaatgcatct
gatgaaagaaataaagcagctgttgaaaaaattggtgatatggcaacaggaggttattct
attacttcattaaataataaaaatttgaaaaaaacttgtattattatggatgaagttgat
ggaatgtctagtggggataaagggggtagttccgctatattaaaattaatagaaaaaacc
aaatgcccaattatatgtatatgtaatgatagacaaaatagtaaaatgagaactttagct
aataaatgttatgatttaaaatttacaacaccaaataaaaatagtgtagttaaaagattg
ttagaaatttgtaaaaaagaaaatattatgatggaaccaaatgctttagaattattatgg
gaaagttcaaatggtgatataagacaaatactcaatgctttacaattgttatctaaaaca
tataaaagaatacaatttttagacataaaaaaagatataaataattcaaataaaaatgta
caatcattagcaaacccctttgaaataacactcaaattattaaattttcatgaatcatca
aaattgaaaataagagaaatcatggatctattttttgtagactacgaattaataccatat
tttataagtgaaaattatacaaatatttttaatgataatgataactcgcctaattctatg
aataaatggaatacatttgcacaaatttcttatgacttatctttagcagaaaaaattaaa
tataatttaaaaaccactatggattattcattattaccacatttttctatattatcgtgt
gtatgccctgttatgagaataagatctctaaaatcttttatgcaaggtagaataaatttc
ccatctgcttttggaaaaatatcaacatttaataaaaataaaagattactaaatgaatta
tgttttaatctatcttataaacttaatgtttatccaaagtatatgataactagtggattc
cttaattacatatattataaaattatagttccattacaaaaaaataatgtaaatgattct
atacaattaatggaacaatataatataacaaaagaaatgctaattgaaaatataccatct
ttaagattaccaatacaagaaaatttatatgataaattggattcgaaaattaaagcttct
tttactcgccaatataatgcaacccatgttgttaagaatgatccaaatgctgttaaaaaa
agtcttaaatctattgataaaaaatcatataaaaataatgacgatgaaatagatgaagat
atggatgacttaagtgactcaaaagaagacaaagatgatgatgttttagtcaaaaccaag
cctgataaaaaaaatactaccaaaaataaattaactacaaaaccaaaaacttccaaaaaa
aaataa
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