KEGG   Plasmodium berghei: PBANKA_0407100
Entry
PBANKA_0407100    CDS       T01111                                 
Name
(RefSeq) splicing factor 3B subunit 1, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
pbe  Plasmodium berghei
Pathway
pbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PBANKA_0407100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbe03041]
    PBANKA_0407100
   03036 Chromosome and associated proteins [BR:pbe03036]
    PBANKA_0407100
Spliceosome [BR:pbe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PBANKA_0407100
 Complex B
    PBANKA_0407100
 Complex C
   U2 SnRNP specific factors
    PBANKA_0407100
Chromosome and associated proteins [BR:pbe03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PBANKA_0407100
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT HEAT_EZ Htt_N-HEAT_1 HEAT_EF3_N UME mTOR_dom
Other DBs
NCBI-GeneID: 55148184
NCBI-ProteinID: XP_034420128
UniProt: A0A509ADZ9
LinkDB
Position
4:complement(256155..259964)
AA seq 1269 aa
MGTKKNEPNKKDTKKKNIKYEINNTVNDIKYVREIDPLLNEDDSENVFLNNNNININTLK
NEIVKNELDNNNNIDDVSLGLIKDKSIKNRENEFQKKKYDYILSPERADPFEEKSPSPGE
RTYTDIMLDINKKNIKNKILNNNKKENNAVSTSDIHSHQEEKKKMKLGNENGDGIKSKWD
FINENQDIVDFGNMATPAPNKWTETPFILNDGNIKNKKKKMSRWDKTVENSSNNNIGDSK
IINSDINNLKTPIISGNKYNENMIINTPILGTNVMTPITPYSGSIQNNDYIKFKIKNEMD
FRNRPLTDEDLDNLLPSEGYEIVKPPEEYETIRKNKLKILFKNMKDTTTTPLIQGNTNII
LNSGQSTLDIVDNTFIDENGKSTFMSHTPFYNLPNADNTLKEEDEKILREQNKIMEITNP
QLLNELKYIEIKNEDYIYFNKLFQNYNEDDLSQDEIKERKIMLLLLKIKNGTPSIRRNAL
RTITDKVKELGPENLFNLILPMMMQNTLEDQERHLLVKVIDRILFKLDDLVRPYVHKILV
VIEPLLIDEDYYARVEGREIISNLAKAAGLATMIGIMRPDIDHPDEYVRNTTARAFAVVA
SALGIPSLILFLKAVCQSKKSWEARHTGIKIVQQMAILTGCAILPHLKQLVNIIAHGLHD
EHQKIRTITALALAALAEAATPYGIEAFDPVLRPLWKGITEYRGKCLASFLKAIGLIIPL
MDGYHANYYTKEVMIILINEFNSPDEEMKKIVLKCVKQCIQTEGIEKDYINQEIVNPFFE
QFWIIRNSNDKKNFNLIVDTTVEIANKIGGAVVIAKIVDDLKDPSESYRKMVMQTIQNII
NNLGVDDIDQKLEEQLIDGILYSFQEQTSDDYYVLLNAFDVIVNKLKLRMKPYLPQIAGI
IRWRLNTPLPKVRQQSAELIARISKLIKICDEQQMLGHLALYLYEYLGEEYPEVLGNILK
ALKSIVIVLGVNNMTPPIKDLLPRITPILKNRHEKVQENVIDLIGIIADKGGDMVSPKEW
DRICFDLIELLKSNKKLIRRATIQTFGYIARTIGPFEVLTVLLNNLRVQERQLRVCTTVA
IAIVADTCLPYSVLAALMNEYKTQDLNVQNGVLKALSFMFEYIGEIAKDYVYSVVSLLEH
ALTDRDLVHRQIATWACKHLALGCFGLNREDALIHLLNHVWPNIFETSPHLIQAVIDSID
GFRVALGPAIIFQYLVQGIFHPSKKVREIYWKIYNNVYIGHQDSLVPIYPPFETIGDSNF
ARDELRYVL
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgggaactaaaaaaaatgaaccaaataaaaaggatacaaaaaaaaaaaacataaaatat
gaaataaataatactgtaaacgatataaaatatgttagagaaattgatcctttgctaaat
gaagatgattctgaaaatgtgtttctaaataataataatataaacataaatactttaaaa
aatgaaatagttaagaatgaattagataacaataataatattgatgatgtgtcacttgga
ttgataaaagataaatctataaaaaaccgtgaaaatgaatttcaaaaaaaaaaatatgat
tatattttatcgccagaaagagcagatccctttgaagaaaaatccccatctcctggggaa
agaacatacacagatattatgcttgatattaataaaaaaaatataaaaaataaaatttta
aataataataaaaaagaaaataatgctgtaagtacatctgatattcatagtcatcaagaa
gaaaagaaaaaaatgaaattgggaaatgaaaatggagatggaataaaaagtaaatgggat
tttataaatgaaaatcaagatattgttgattttggaaatatggcaacacctgctccaaat
aaatggactgaaactccttttattctaaatgatgggaatataaaaaataaaaaaaaaaaa
atgtcaagatgggacaaaacagtggaaaatagtagtaataataatattggagatagtaaa
ataattaattcagatattaataatcttaaaactccaattatatcaggaaataaatataat
gaaaatatgataataaatacaccaattttgggaactaatgttatgacgcccataacacca
tattcaggttctatacaaaataatgattatataaaatttaaaataaaaaatgaaatggat
tttagaaatagaccattaacagatgaagatttagataatttgttaccttcagaaggatat
gaaatagttaaacccccagaagaatatgaaactattagaaaaaataaattaaaaatatta
tttaaaaatatgaaagatacaacaacaacacctttaattcaagggaatacaaatataatt
ttaaattcaggacaaagtacattggatattgttgataatacatttattgacgagaatggg
aaaagcacatttatgagtcatacacctttttataatttaccaaatgctgataatacttta
aaagaagaagatgaaaaaattttgagagaacaaaataaaataatggaaatcacaaatcca
caacttttaaatgaactaaaatatattgaaataaaaaatgaagattatatttattttaat
aaattatttcaaaattataatgaagatgatttatcacaagatgaaataaaagaaagaaaa
attatgttattacttttaaaaataaaaaatggtacaccttcaattagaagaaatgcatta
agaacaataacagataaagtaaaagaattagggcctgaaaatttgtttaatttaatatta
cctatgatgatgcaaaacactttagaggatcaagaaagacatctgttagttaaagttata
gatagaatattatttaaattagatgatttagttagaccatatgttcataaaattctagtt
gttatagaacctctacttatagatgaagattattatgcgagagttgagggccgagaaata
attagtaatttagcaaaagctgcaggtttagcaactatgataggtattatgagacccgat
attgaccatccagatgaatatgtaaggaatacaactgcccgagcatttgctgttgttgca
tctgcattaggtatcccatctttaatattatttctaaaagcagtttgtcaatccaaaaaa
agttgggaagcaaggcataccggtataaaaattgtgcaacaaatggcaatattaacagga
tgtgcaatattaccacatttaaaacaattggtaaatattattgcacatggattacatgat
gaacatcaaaaaattcgaaccataactgcattagctttagctgctttagcagaagcagca
acgccatatggtattgaagcatttgatcctgttcttcgaccattatggaaaggaattaca
gaatatcggggaaaatgtttagcatcttttttaaaagcaataggacttattataccatta
atggatggatatcatgcaaattattatacaaaagaagttatgattatattaataaatgaa
tttaattctccagatgaagaaatgaaaaaaatagttttaaaatgtgttaaacaatgtatt
caaacagaaggcatagaaaaagattatataaatcaagaaattgtaaatccattttttgaa
cagttttggattataagaaatagtaatgataaaaaaaattttaatttgattgttgataca
acagttgaaattgcaaataaaattgggggagcagttgttatagccaaaatagtagatgat
ttaaaagatccatcagaatcttatagaaaaatggttatgcaaacaatacaaaatataatt
aacaatttaggagttgatgatatagatcaaaaattagaagaacaattaattgatggaatt
ttatattcttttcaagaacaaacatcagacgattattatgttttattaaatgcatttgat
gttattgtaaataaattaaaattacgaatgaagccatacttaccacaaattgctggtata
ataagatggagacttaatactccattaccaaaagtaagacaacaaagtgctgaacttata
gctcgcatttctaaactaattaaaatatgtgatgaacaacaaatgcttggtcatttagct
ttatatctatatgaatatttaggagaagaatatccagaggttttaggaaatattttaaaa
gccttaaaatctattgtaatagtattaggagtaaataatatgacacctccaattaaagat
ttgttaccaagaattacaccaattttaaaaaatagacatgaaaaagttcaagaaaatgtt
atcgatttaattggaattattgcagataaaggaggggatatggtttccccaaaagaatgg
gatagaatatgctttgatttaatagaacttttaaaatcaaataaaaaattaattagaaga
gctacaatacaaacatttggatatatagcacgcactattgggccgtttgaagtcttaaca
gtattattaaataatttaagagttcaagaaaggcaattaagagtatgtactacagttgct
atagcaattgttgctgatacttgtttaccatattctgttttagcagcccttatgaatgaa
tataaaacacaagatcttaatgtacaaaatggtgtgttaaaggccttatcttttatgttt
gaatatattggagaaatcgcaaaagattatgtttattctgttgtatcattgttagaacat
gcattaacagatagagatttagttcatagacaaatagctacatgggcatgtaagcattta
gctttagggtgttttggacttaaccgtgaagatgctttgatacatttgttaaatcatgtt
tggccaaatatttttgaaacatcgccacatctaatacaagctgttatagattctatagat
ggttttagagttgctcttggtccagctattatatttcaatacttagtgcaaggtattttt
cacccttcaaaaaaagttagagaaatttattggaaaatttataataatgtttatattggg
catcaggatagccttgtcccgatatatcctccgtttgaaacgattggagatagtaacttt
gctcgggatgaattacgttatgttttataa

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