KEGG   Plasmodium berghei: PBANKA_0409100
Entry
PBANKA_0409100    CDS       T01111                                 
Name
(RefSeq) pre-mRNA splicing factor, putative
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
pbe  Plasmodium berghei
Pathway
pbe03013  Nucleocytoplasmic transport
pbe03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pbe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PBANKA_0409100
   03015 mRNA surveillance pathway
    PBANKA_0409100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbe03019]
    PBANKA_0409100
   03041 Spliceosome [BR:pbe03041]
    PBANKA_0409100
Messenger RNA biogenesis [BR:pbe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PBANKA_0409100
Spliceosome [BR:pbe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    PBANKA_0409100
SSDB
Motif
Pfam: PWI IF-2B
Other DBs
NCBI-GeneID: 55148205
NCBI-ProteinID: XP_034420148
UniProt: A0A509AE28
LinkDB
Position
4:complement(<329754..>331302)
AA seq 422 aa
MKGGGFYKGTSSEQTPFFVDKEKKLIEKLSWPDIYNYKININKINFDIVEKWVQKRLIDL
LGFEDDILCDYCISQLKDEQNGRDYEENRYLDSKKLKINITGFIGNKKSDIFIRELLELL
IENEKNEERILKSQLENKKSEMESAKNETVSITKNIKTLKNIYNGNDENCENKNQNISIN
FIKDKMKRENRYRKNERTIISSNESDNISYNKKKKKKEKKKSISLQSDSSSFSTYTNKKN
YKRQLNKHNNKDSDSDTDSTPISSSESKSSEYKKKKKKREKYLKYEKSDNDDHRRDHVVR
KRKGIRENERKKDSGRHRNRHRTRDRIRCRSRNKHKGLIRHRSRDISRDRRRRRYRSKSR
ESNKSSESYYSEENYRSSSSNSDKSDEIKKERKLDNHSNDSNKSDSDDSSNNSYQPSESS
SN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaaggaggtggattttataaaggaacgagtagtgaacagactccattttttgttgat
aaggaaaagaagttgattgaaaaattatcgtggccggatatttataactataaaataaat
ataaataaaatcaattttgatatagtagaaaaatgggtacaaaaaagattaatcgattta
ttaggatttgaagatgatatattatgtgactattgcatatctcaacttaaggatgaacaa
aacggaagagattatgaagagaatcgttacctggattcaaagaagttgaaaataaatatc
actgggttcatagggaataaaaaaagcgacatatttattagagaattgctagaattatta
atagaaaatgaaaaaaatgaagaaagaattttaaaatctcaacttgaaaataaaaaaagc
gaaatggaatcagctaaaaatgaaactgtatctataacaaaaaatataaaaactttaaaa
aatatatataatggaaatgatgaaaattgtgagaataaaaatcaaaatatatctataaat
tttataaaagataaaatgaaacgagaaaacagatatagaaaaaatgaacgtactattata
tcatctaacgaaagtgataatatatcatataataaaaaaaaaaaaaaaaaagaaaaaaaa
aaatcaatctcactgcaatccgattcttcatcatttagtacttatacaaataaaaaaaat
tataaaagacaattaaataaacacaataataaagactctgattctgatacagattctact
cctatttcatcatctgaaagtaaatcctctgaatataaaaaaaaaaaaaaaaaacgagaa
aaatatttaaaatatgaaaaaagtgacaacgatgatcacagaagagaccatgtagtaagg
aaaagaaaaggcataagagaaaatgaaaggaaaaaggatagtggaaggcatagaaacaga
cacagaactagagatcgaatcagatgtagaagtagaaataaacataaaggactaattagg
cacagaagtagagacataagtagagatagaagaagaaggagataccgttctaaatctagg
gaaagcaataaatcgagtgagtcgtattatagtgaagaaaattatagatcatcatcgagt
aacagtgacaaaagtgatgaaataaaaaaagaaagaaaattagacaaccattcaaatgat
tcaaataaatctgactctgatgacagtagtaataattcataccaaccttctgaatcatca
tcaaattga

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