Plasmodium berghei: PBANKA_0415500
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Entry
PBANKA_0415500 CDS
T01111
Name
(RefSeq) coatomer subunit beta, putative
KO
K17302
coatomer subunit beta'
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbe04131
]
PBANKA_0415500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbe04147
]
PBANKA_0415500
Membrane trafficking [BR:
pbe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PBANKA_0415500
Exosome [BR:
pbe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
PBANKA_0415500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
TPR_GEMI5
WDR54
Motif
Other DBs
NCBI-GeneID:
55148272
NCBI-ProteinID:
XP_034420212
UniProt:
A0A509AFQ6
LinkDB
All DBs
Position
4:552926..555925
Genome browser
AA seq
999 aa
AA seq
DB search
MPLNLDIKKKLNSRIGKVKCVDIHENEPWILAALYNGKLIIFDYSNQNTIKNIEVSGYPL
RCAKFIEKKQWIICTGDDMIIRVYNYNTFEKIIFFEGHSDYIRYIEVHQTLPYILTCSDD
MSIKLYDYENNFEKLCSFENHVHYVMMCKFNPKDTYIFASASLDKTIKIWGVQNNMPVVT
KPHFTLTGHIKGVNCIDYSSSGETSYIISGSDDKTIRVWDYHTKQCVHILSGHTQNISCL
IYHSNLPIIISSSEDCNVKIWNSSMYKLETTLNYNMDKCWSICAKKTKNDLCIGYDEGLI
VIQMGSDKPIYTMFKNKIIYIKNADIFIINLQNINNEDNYNDGDIYKVNKKELGNCDFYP
TNVSFHPNGRFVCVSGHQEFNIYTSQVLRNKAYGKSPFFVWGNNGDYAIKDEGNKIVIYK
EFTAFHSFQTPYNITELFGGYLLGVKSNNFICFYDWNYYNMIRKIDINVKNVYWNDSGTY
VAISTEESVYILSYNTKDETSNKDMKCLEPNDNINMGEENGNIVDENNFELENEINEYIE
SGIWIYDSFVYVSRNLRLYIYTKKFNDIYVYIDKYLYICGYVYEYDRIFLLDTNYNFYSF
HIPIAYLQYQKYIINKDFEFADNLLSTIPEYLHNKLSLFLEKMGYKNKALTICTDLEKKF
ELALSIGNLQLCIEIIKQIENKEDKATVQNKYKALGDTSLIYNDISMAIHCYKKTNDYSS
LLIILSTLGDKIGIEELGKICLKNKKYNIAFICYFLLHKINKCVDILVKSKNYAYASFFS
RIYKPSLLPNILLKWKNNLNKTYQISPIELLTPDKNPEYFPDYELAIKCESIFEKTQTLG
VTQNYSTLKKLIDINIMDEINEIGYEQVENIFVKQFDIDLEKDVKNFDMINSLSSVQKKE
TTIKSINEIIDKEYVENKTDSNSSNLKRESFVSENNNTSFSNSHEINQNSNDSYKKNSKK
TSNNSDNLANLNNSDENISFEMKNETFNSVNDQIDKESE
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttaatttagatataaagaaaaaattaaattctcgaattggtaaggtgaaatgt
gttgatattcatgaaaatgaaccatggatccttgcggctctttacaatgggaagttaatt
atatttgactactctaatcagaatacaataaaaaatatagaagtatctggatatccatta
cgatgtgcaaaatttattgaaaaaaaacaatggataatatgtacaggcgatgatatgata
ataagggtttataattataatacttttgagaaaataatattttttgaaggacatagtgat
tatataagatatattgaagttcatcaaacattaccatatatattaacatgctcagatgac
atgagcataaaattatatgattatgaaaataattttgagaaattatgttcttttgaaaat
catgttcattatgtaatgatgtgtaaatttaatcctaaagatacttatatttttgcatcc
gcttctttagataaaactataaaaatatggggtgtgcaaaataatatgccagtagttact
aagccacattttaccttaacaggtcatataaaaggtgtaaattgtattgattattcatct
agtggggaaacatcatatattattagtggaagtgatgataaaacaatacgtgtatgggat
tatcatacaaaacaatgtgtacatatattaagtgggcatacacaaaatatatcatgctta
atttatcatagtaatttgcctataattatttcttcatcagaagattgtaatgtaaaaata
tggaatagttctatgtataaattagaaaccacattaaattataacatggataaatgttgg
tctatatgtgcaaaaaaaacaaaaaatgatttatgtataggatatgatgaagggttaata
gttattcaaatgggatctgataagcctatatatacaatgtttaaaaataagataatttat
ataaaaaatgctgatatatttattataaatttacaaaatataaataatgaggataattat
aatgatggtgatatatataaagtaaataaaaaagaattaggaaattgtgatttttatcca
acaaatgtttcatttcatccaaatggcagatttgtatgtgttagtgggcatcaggaattt
aatatatacacatcgcaagtattaagaaataaagcatatggaaaaagtccattttttgtg
tggggaaataatggtgactatgctataaaagatgaaggtaataaaatagttatatataaa
gagtttactgcatttcattcgtttcaaaccccttataatattactgaattatttggaggg
tatttattaggagttaaatcaaataactttatttgtttttatgattggaattattataat
atgataagaaaaatagatataaatgtaaaaaatgtatattggaatgatagtggtacatat
gtagcaatttctacagaagaaagtgtatatatattgagttataacacaaaagatgaaaca
tctaataaggatatgaaatgtttagaaccaaatgataatattaacatgggcgaagaaaat
ggtaatattgttgatgaaaataattttgaacttgaaaatgaaataaatgaatatatagaa
agtggaatatggatatacgatagttttgtgtatgtttcaagaaatttaagattatatata
tatacaaaaaagtttaatgatatatatgtatatatagataaatatttatatatttgtgga
tatgtatatgaatatgatagaatatttttgttggatacaaattataatttttatagtttt
catataccaatagcttatttacaatatcagaaatatataataaataaagattttgaattt
gctgataatttattatctactattcccgagtatttacataataaattaagtttattttta
gaaaaaatgggatataaaaataaggctttaactatttgtacagatctggaaaaaaaattt
gaattagctctgtcaattgggaatttacaactatgtatagaaattataaaacaaattgaa
aataaagaagataaagcaacagttcagaataaatataaagcattaggagatacatcattg
atatataatgatatatcaatggcaatacattgctataaaaaaacaaatgattattcgtct
ttgctaattattttatcaacattaggggataagataggtattgaggaattgggaaaaata
tgtttaaaaaacaaaaaatataatatcgcatttatatgttattttttattacacaaaata
aataaatgtgtagatatattggtaaagagtaaaaattatgcatatgcttcatttttttca
aggatatataaaccatctttactaccaaatatattattaaaatggaaaaataatttaaat
aaaacataccaaatatctcctattgaattattaacacccgataaaaatcctgaatatttt
cctgattatgaattagctataaaatgtgaatcaatttttgaaaaaacccaaacccttggg
gtaactcaaaattattcaacattaaaaaaactaattgatataaatattatggatgaaata
aatgaaattggttatgaacaagttgaaaatatttttgttaaacaatttgatattgatctt
gaaaaggatgttaaaaatttcgatatgatcaattccttgagctctgttcagaaaaaagaa
acaactataaaatcgataaatgaaatcatagataaagaatatgtagaaaataaaacagat
agcaattcttcgaatttaaaacgagaatcatttgtaagtgaaaataataatacatcattt
tcaaactcacatgaaataaatcagaatagtaatgattcttataaaaaaaatagcaaaaaa
acatcaaataatagtgataatttagcaaatttaaataatagtgatgaaaatattagtttc
gaaatgaaaaatgaaacatttaattcagtgaatgatcaaatagataaagaatcagaataa
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