Plasmodium berghei: PBANKA_0502300
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Entry
PBANKA_0502300 CDS
T01111
Name
(RefSeq) tRNA pseudouridine synthase, putative
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbe03016
]
PBANKA_0502300
Enzymes [BR:
pbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PBANKA_0502300
Transfer RNA biogenesis [BR:
pbe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBANKA_0502300
Prokaryotic type
PBANKA_0502300
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
DUF5667
Motif
Other DBs
NCBI-GeneID:
55148326
NCBI-ProteinID:
XP_034420263
UniProt:
A0A509ADS1
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All DBs
Position
5:84710..86146
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AA seq
478 aa
AA seq
DB search
MLVNICMCNNKKNKNIFYLNPNKNHKKSINNINKYSKSHIDKHDHILRYYFPYPHYDGHC
NNKRNIKCDNLFNSKKIKNGCIGDCRNSKIYYDWRITKIKDISKNKKIKNVNPHLDSFKD
KDKNVTEKIEKNNLKHKQILENIQNNLNTNVEKQKTENIKSNKLDVDLKSETNTSNNNIS
KNEVDIYITKYEKKILNNNSRIMNLTPSVVQNNTKKEATIDDILYGGFLNIYKPVKLYSM
KVCEKIKKILKNYFININKNNIKIKVGHGGTLDPFAEGVLMIGIQRGTNELSNFLKCYKQ
YLAVSVLGIETDTLDREGRIIKMKDMKGIKKGDDSITELLQSDKEYAENLKSELSKSINK
FIGWIDQIPPIYSSKRVKGLRLYEYARKNIPVKIKSNKVHLKNIKYLKELELPFFDLHIH
CSGGTYIRSLIRDIAHSINQYATLIKLIRIKQKEHSYKNSLHYDDINIENIKKYFIKL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcaatatatgtatgtgtaataataaaaaaaataaaaacatattttatctaaac
ccaaataaaaatcataaaaaatctataaataacataaataaatattcaaaaagccacatt
gacaagcatgatcacatattgaggtattattttccatatccacattatgatgggcattgt
aataacaaaagaaatattaaatgtgataatttgtttaactcaaaaaaaataaaaaatggt
tgtattggcgattgtagaaatagtaaaatatattacgactggcgtattacaaaaataaag
gatatctctaaaaataaaaaaattaaaaatgtaaacccccatcttgattctttcaaagac
aaagataaaaacgttactgaaaaaatagagaaaaataatctcaaacacaaacaaattcta
gaaaacatacaaaataacttaaatacaaatgtagaaaaacaaaaaacagaaaatatcaaa
tccaacaaattggatgtagatttaaaaagtgaaacaaatacttccaataataatatctcg
aaaaatgaagtagatatatatataacaaaatatgaaaaaaaaattttaaataacaacagt
agaataatgaacttaacgccaagtgttgtacaaaataatacaaaaaaggaagcaacaatt
gatgatatattatatggaggttttttaaatatttataaacctgtcaaattatattctatg
aaagtatgtgaaaaaattaaaaaaatcttaaaaaactattttattaatataaataaaaat
aacattaaaataaaagtaggacatggaggaacattggatccatttgcagaaggggtttta
atgataggaatacaaaggggtacaaatgaattgtcaaactttttaaaatgttataaacaa
tatttagcagtttctgtattagggatagaaaccgatacgttggatagagagggaagaata
attaaaatgaaagacatgaaaggaatcaaaaaaggagatgatagtataactgaattgtta
caaagtgataaggaatatgcagaaaatttaaaaagcgaactatctaagagtataaacaaa
ttcattggctggattgatcaaataccacctatttattcgtccaaaagagttaaaggatta
agattatatgaatatgcacgaaaaaatatacctgttaaaatcaaatcgaataaagttcat
ttaaaaaatataaaatatttaaaagaattagaacttccattttttgatttgcacatacat
tgttcaggcggaacatatataagaagtctaatacgagacattgcacattccataaatcaa
tatgctactctaattaaattaattaggataaaacaaaaggagcattcctacaaaaattct
ttgcattatgatgacataaatatcgaaaatattaagaaatattttattaagttataa
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