Plasmodium berghei: PBANKA_0504500
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Entry
PBANKA_0504500 CDS
T01111
Name
(RefSeq) cytoplasmic dynein intermediate chain, putative
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pbe
Plasmodium berghei
Pathway
pbe04145
Phagosome
pbe04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
PBANKA_0504500
09142 Cell motility
04814 Motor proteins
PBANKA_0504500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_0504500
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pbe04812
]
PBANKA_0504500
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
PBANKA_0504500
Cytoskeleton proteins [BR:
pbe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
PBANKA_0504500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
55148349
NCBI-ProteinID:
XP_034420286
UniProt:
A0A509AFK2
LinkDB
All DBs
Position
5:178009..179988
Genome browser
AA seq
659 aa
AA seq
DB search
MDSDVEYDILKPIDEEERIRLQNKLNEQRIELEKKKIYLEELKKFNENGILNDNKMTNVE
EIPDPDEMVKKFIDELEKEQDDDEINLKDQIKDNSNIKYIETHRINRNAKSDMFHVKPRS
IEEYVDKSFLFKKKASVKNFNFKINKMNEEKCIHIEKKMIKNFDKSVQVDIIFEKDENNL
DTKNNMKRNIKSLYEKTRGCQIKLTEKEKISDNKIENEKNKEEKKSKKIEQNIQNNIIKS
KSFNQFIEKCSKIIERYIGEQEMFNATLNFDTNKFKNQSKDSENWEKLKLINNYYCKTYT
NNRPITDIKTCNIYSELFLASYGASETSTYNDPDGYVLVWNSLMTNRPEYTLISQSPVCT
CLFNKFNPYIVIGGTYTGNILLWDIRINQKKSIHKTILSSQGHLHPIYCAEIIGTQNSHN
LISVDTDGRLCNWSLNMLTYPSDIVDLKKINKEISCSCFSFQEGEINTLYGGTEDGSIFQ
AQIHGNKTGITESYNIHNGPLTSIQFHPFIEGMEDNNDLILTSSVDWSCKLLSIKNPENI
LFTFDGFDDYIMDVKWNPAHPGIFATCTSNSKIQLWNISNDIENYYFETILNVNAVNKIA
WSHDGKKLIAADSNGYLTLWNASNDIYQPRSDEIAKFDKQIEKLKSNYTEFDIPELEPI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatgtggagtatgatatactgaaaccaattgatgaagaagaaagaataaga
ttacaaaacaagctaaatgagcaaaggatagaattagaaaaaaaaaaaatatatttagaa
gaattaaaaaagtttaatgaaaatggaatattaaatgataataaaatgacaaatgttgaa
gaaattccagaccctgatgaaatggtaaaaaaatttattgatgaattagaaaaagaacaa
gatgacgatgaaataaatttgaaggatcaaataaaagataatagtaacattaaatatatc
gaaactcatagaattaatcgaaatgccaaatcagatatgtttcatgtaaaaccaaggtct
attgaagaatatgtagataaatcttttctttttaaaaaaaaagcatctgtaaaaaatttt
aattttaaaattaataaaatgaacgaagaaaaatgtatacacattgaaaaaaaaatgata
aaaaattttgataaatcagttcaagtcgatataatatttgagaaagatgaaaataattta
gatacaaaaaataatatgaaaagaaatataaaaagtttatatgaaaaaacaagaggatgt
caaattaaactaacagaaaaagaaaaaataagtgataataaaattgaaaatgaaaaaaat
aaagaagaaaaaaaaagtaaaaaaatagaacaaaacatacaaaataatataataaaaagt
aaaagttttaatcaatttattgaaaagtgttcaaaaataatagaaagatatataggtgaa
caagaaatgtttaatgctacacttaattttgatacaaataaatttaaaaatcaatctaaa
gattcagaaaattgggaaaaattaaaacttataaataattattattgtaaaacatatact
aataatagaccaataacagatataaaaacatgtaatatatacagtgaattatttttagct
tcttatggtgcatctgaaacaagtacatataacgatcctgatggatatgtattagtctgg
aatagtttaatgactaatcgaccagaatatacacttatatctcaatcccctgtatgtaca
tgcttatttaataagtttaatccatatatagttattggtggtacatatacaggtaatata
ttattatgggatataagaataaatcaaaaaaaatctatacataaaacaattttatcttca
caagggcatttgcatcctatatattgtgcagaaattataggaacacaaaattctcataat
ttaataagtgttgatacagatggaaggttgtgtaattggtcattgaatatgcttacatat
ccatccgatatagttgatttaaaaaaaataaataaagaaatatcatgttcatgtttttca
tttcaagaaggagaaataaatacattatatggtggaacagaagatggttcgatatttcaa
gcacaaatacatggaaataaaactggaattacagaatcatataatatacataatggacca
ttaacttcaatccaatttcatccatttattgaaggtatggaagacaataatgatcttata
ttaacttcatcagttgattggagttgtaaattgctcagtataaaaaatccagaaaatatt
ttatttacatttgatggatttgatgattacataatggatgttaaatggaatcctgcccat
ccaggtatatttgcaacatgtactagtaattctaaaatacaattatggaatatttcgaac
gatattgaaaattattattttgaaacaattcttaatgtaaatgcagttaataaaattgcg
tggtcacatgatgggaaaaaactaattgctgcagattcaaatgggtacttaacattatgg
aatgcatctaatgatatatatcaaccaagatctgatgaaattgcaaaatttgataaacaa
attgaaaaactcaaatcgaactatactgaatttgatattcccgaattggaacccatctaa
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