Plasmodium berghei: PBANKA_0506600
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Entry
PBANKA_0506600 CDS
T01111
Name
(RefSeq) serine/arginine-rich splicing factor 4, putative
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_0506600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_0506600
Spliceosome [BR:
pbe03041
]
Common components
Common spliceosomal components
SR proteins
PBANKA_0506600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
DUF4926
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
55148370
NCBI-ProteinID:
XP_034420307
UniProt:
A0A509AL35
LinkDB
All DBs
Position
5:complement(281228..283197)
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AA seq
481 aa
AA seq
DB search
MGYRSSRYNRTSCIYVGNLPGNVVEDEVYDLFGKFGRIKYIDIKLTRGSTSTAYAFVHYY
DIKDAEYAIERRDGYKFDGERLRVEFSGENKSFGKYRRKEDGIGPPLRTEHRIIVSNLPD
NCKWQHLKDIMRQCGDVGYANIEHGKGIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKV
RRDKRSLSYIKKHRSDYYSPRHKKKRIYSDESESNISRRRSKYSTSSSKGHNKYETDSDT
SYDKKEKTRDGNKNKRSYSSDEKRDNKYSRSESSNSLSDDRTYKKKKNNYSTSRDRSSKD
SKYHSEKESRQSKSHSKSVSGENSRSEEKSRSISGDISNNEKQNAGKNVKRENILSAEKE
EKEERQGRSGSEKSGYNSAASEVKKDDNEDKNDEVNNEKFPVIPKGRKGATKRKPKAEKI
KKRKNENKSENEDLKSVSNDGNKSDANKSDKENNNDTSVNQTEETKPKRGRTKKKANPEG
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgggttatagatcttcaaggtataatagaacatcgtgtatatatgttggaaatttacca
ggaaatgttgtggaagacgaagtctatgatttatttggaaagtttgggcgtataaaatac
attgatataaaattaacaagaggatcaacttctacagcatatgcgtttgttcattattat
gacataaaagatgcagaatatgcaatagaaagaagagatggatataaatttgatggggaa
cgcctacgtgttgaattttctggagaaaataaaagctttggaaaatatcgaagaaaagaa
gacgggattggcccacctttaagaacagagcatcgaattattgttagcaatttaccagat
aattgtaaatggcaacatttaaaagacataatgaggcaatgtggtgatgtgggatatgcc
aatattgaacatggtaaaggtatcgtggaatttgttgaccgcgatggaatgctatatgca
attgaaaaatttgatcgtgcagaatttaaagtccatgatcaggttacaaatattaaagtt
agaagagataaaaggagtttatcttacataaaaaagcatagaagtgattattatagtcca
cgacataaaaaaaagcgaatatatagtgatgaatctgaatcaaatatatcgcgacgacgc
agtaaatatagtacctcgtcaagtaaaggacataataaatatgagacagatagtgatact
tcatatgataaaaaggaaaaaacaagagatggaaataaaaacaaaagaagctattcttct
gacgagaaaagagataataaatatagtagaagtgaatcgagtaattcattaagtgatgat
agaacttataaaaagaaaaaaaataattacagtacttcaagggatagatcaagcaaagac
tccaaatatcattcagaaaaggaaagtagacaaagtaagagtcatagtaaaagtgtaagt
ggagaaaacagtaggagcgaagaaaaaagtagaagcattagtggagatataagcaataat
gaaaaacaaaatgcaggaaaaaacgtgaaaagggaaaatattttaagcgctgaaaaagaa
gaaaaagaagaaagacaagggcgtagtgggtctgaaaagtcaggatataatagcgcagct
tcggaagtaaagaaagatgataacgaggataaaaatgatgaagtgaataatgagaagttt
ccagttattccgaaaggaaggaaaggggctactaaaaggaagccaaaagctgaaaagata
aaaaaaagaaaaaatgaaaataaaagtgaaaatgaagatttgaaaagtgtttcaaatgat
ggtaataaaagtgatgcaaataaatcagataaggaaaataataacgatacctcagttaat
caaactgaagaaacaaaacccaaaagaggtagaactaaaaagaaagcaaaccctgaagga
aattaa
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