Plasmodium berghei: PBANKA_0518800
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Entry
PBANKA_0518800 CDS
T01111
Name
(RefSeq) U2 snRNA/tRNA pseudouridine synthase, putative
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbe03016
]
PBANKA_0518800
Enzymes [BR:
pbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PBANKA_0518800
Transfer RNA biogenesis [BR:
pbe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBANKA_0518800
Prokaryotic type
PBANKA_0518800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
55148493
NCBI-ProteinID:
XP_034420429
UniProt:
A0A509AGH8
LinkDB
All DBs
Position
5:complement(680579..683761)
Genome browser
AA seq
1060 aa
AA seq
DB search
MYLPYIENHGIEYLIRKNMHNLEGINGKVKTIFEDFHVHEITKNNVILHLDEIINKDKIN
QILEDKEKRDETNIFQNISNSDLCIQHFKKHINEFDQNVFKKFLNILHQIYLLKQKKPQK
NELEQSKVENNKIESLNNEPFQKSKRKFTIPYCVLTKFDDPTLYEYNDQTNGDQYSKSND
ILSVDEKKKIARKNIHNAINKYYPFLLTETKTVTKLDTVISHGNILSDQITSHLNESYTY
EHLNHKINTGPQDQNEHKENDKKPFTIIEVYPNFNCLKIITPPEIFDKLKSNAKKLRSNK
NYDFENVILEGLEKLKDFSKDKNKQNNHDIKISLEKKSEYHNDINHQKDTHLNLFQNKEL
GARYDNIINDDAKCDNFSIHSLKKKRRINELSNEENIIPILSNTNNLASPKDQVSKSEKY
ICTEIGVDTTVAMIKEETEEIEMEEESTNNFLKNDNNSYKMPQEKEGRCLSSDNFIDKIN
KMRGEKRSIKRDKKYLHFNLYKENKDICEILKKLKIIFKKNNSDISYCGIKDKRGITIQK
FCIQKIKKEDIYKMLINNSNWCNSVYLSNLEYKKNKLSLGYLKGNFFKILIRGVNNNEDE
KIKFHNLFEILKNFGFINYYGHQRFGSKKIKNYQIGISILKKNYKQALFLIIENTNLNPE
KKKTLMNYLDKVEKEFLQSNNIIHKSENENGKSNVDLNEIGPINPDSDLKPDSDTQILNS
NSDKPIKIATIKNEKKFEKKKKKYQKNNDYLNRFLNKKQNEKNIIPNEIEEIINSISNNS
HVEKIILGSLKNNRNFKNAFINIPKDIFSLFIHATQSLIFNILVNIRMKKFGFKVVIGDL
VQLPYKGNYETELKSLDGVNSDYTYDSMSESETNYPEKKLNDSSSNNEIDFDEKKIIIIT
EENISQYNIYDVVLPLPGDKNTLFPSNLINEYKKVLESFELSFDHFKSDKYLFNASGGYR
KIVVKPSNLHSVFIKADLAKKNTIPIIKGDLYNLINHKNDQSEQTYDQQLNQHIVFTNSS
LYHEHLIKEIPNYKEMSSIFLTCSLPKSSYITVALMEIIK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaccttatattgaaaatcatggaattgaatatctgattaggaaaaatatgcat
aatctcgaaggtataaatggtaaagtaaaaacaatttttgaagattttcatgttcacgaa
ataacaaaaaataacgttattctacatttggatgaaataataaataaggataaaattaat
caaattttagaagacaaagaaaagcgcgatgaaacgaatatttttcaaaatataagtaat
tcagatttatgtattcaacattttaaaaaacatataaatgagtttgatcaaaatgttttc
aaaaagtttttgaatattttgcaccaaatatatttactaaaacaaaaaaaaccacaaaaa
aatgagcttgaacagtccaaagtagaaaacaataaaatcgaatctctaaataatgaacct
tttcaaaaatcaaaaagaaaattcacaattccatattgtgttttaacaaaatttgatgat
cctactttatatgaatataatgatcaaaccaatggggaccaatatagcaaatcaaatgat
attctatcagttgatgaaaaaaaaaaaattgcaagaaaaaatatacataatgctataaac
aaatattatccttttttattaactgaaacaaaaacagttactaaattggatacagttata
tcgcatggaaatatattaagcgatcagataacaagccatttaaatgaatcatatacatac
gaacacttaaatcataaaattaacactggccctcaagaccaaaatgagcataaagaaaat
gataagaaaccttttacaatcatagaagtttatccaaattttaattgtcttaaaattatt
accccccctgagatattcgataaattaaagtcgaacgctaaaaaattacgttctaacaaa
aattacgattttgaaaatgttattttagaaggattagaaaaattaaaagattttagtaag
gataaaaataaacaaaataaccacgatataaaaatatccctggaaaaaaaaagtgaatac
cataatgatataaatcatcagaaggatactcatttaaatttatttcaaaataaggaactg
ggggcacgttatgataacataattaatgatgatgctaaatgcgacaatttttcaatccat
tcgctcaaaaaaaagcgtagaatcaacgaactatcaaacgaagaaaatatcattcctatt
ttgagtaacaccaataatttagctagcccaaaagatcaagtaagtaaaagtgaaaaatat
atatgcacagaaattggggtcgatacaactgttgctatgataaaagaagaaacggaagaa
atagaaatggaagaagaaagcacgaataatttcttaaaaaacgacaataatagttacaaa
atgcctcaggaaaaggaaggacgatgcttaagtagtgacaactttatagataagattaac
aaaatgagaggagaaaaaagaagcataaaaagagataaaaaatatttgcattttaaccta
tataaagaaaataaagatatatgcgaaatattgaaaaaattaaaaataattttcaaaaaa
aataattctgatatatcttattgtggaattaaggacaaaagaggaataacaatacaaaaa
ttttgcatacagaaaatcaaaaaagaagacatatataaaatgttgattaataatagcaat
tggtgtaatagtgtttatttatccaatttagaatataaaaaaaacaaattatctttagga
tatttaaaaggaaattttttcaaaattttaattaggggagtaaataacaatgaagatgaa
aaaataaaatttcacaacctttttgaaattttaaaaaattttggctttattaattactat
ggccatcaaagatttggcagtaaaaaaattaaaaattatcaaattggtatttctatttta
aaaaaaaactacaagcaagctctttttcttatcattgaaaatacgaatttgaatcctgag
aaaaagaagacattgatgaactatttggataaggtggagaaagaatttcttcaatctaac
aatattatccataaaagtgaaaatgaaaatggtaaatcaaatgttgatctaaatgaaata
gggccaattaatccggactcagacctaaaaccagacagcgacactcaaattctgaactcg
aattcagataagccaataaaaatcgccacaataaaaaatgaaaaaaaattcgaaaaaaaa
aaaaaaaaataccagaaaaataatgattatttaaatcgttttcttaacaaaaagcaaaac
gaaaaaaatataatacctaatgaaatagaagaaataataaattcgatatcaaacaattct
catgttgaaaaaattatattaggatcattaaaaaataatcgcaattttaaaaatgcattt
ataaatataccaaaagatatattttcgttgtttatacatgcaacccaaagtttaattttt
aatattttagttaatataagaatgaaaaaattcggatttaaagttgtgataggtgattta
gttcaattgccctataaaggcaattatgaaactgaattaaagagtctcgatggagtaaat
tcagactacacatatgatagtatgagcgaatcagaaacaaattatcctgagaaaaaacta
aatgactcatcttcaaataatgaaattgattttgatgaaaaaaaaataattataataaca
gaagaaaatatttcccaatataatatttacgatgtcgttttacctctccctggtgataaa
aatacacttttcccttctaacttaattaatgaatataaaaaagttttagaatcttttgaa
ttatcatttgatcattttaaatcagacaaatatttatttaatgcatcaggagggtataga
aaaattgtagtcaagccatctaatcttcattcagtttttattaaagcggatttagcgaag
aaaaacacaataccgataataaaaggcgatttgtataatttaataaatcataaaaatgac
caaagtgaacaaacatacgaccagcaacttaaccaacatattgtttttactaacagtagt
ttatatcatgagcatctaattaaagaaataccaaattataaagaaatgtcgtcaattttt
ttaacttgctctttacctaaatcttcttatattactgttgcacttatggaaatcatcaaa
taa
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