Plasmodium berghei: PBANKA_0607600
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Entry
PBANKA_0607600 CDS
T01111
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7, putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pbe
Plasmodium berghei
Pathway
pbe03018
RNA degradation
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_0607600
09123 Folding, sorting and degradation
03018 RNA degradation
PBANKA_0607600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbe03019
]
PBANKA_0607600
03041 Spliceosome [BR:
pbe03041
]
PBANKA_0607600
Messenger RNA biogenesis [BR:
pbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PBANKA_0607600
mRNA degradation factors
5'-3' decay
Lsm complex
PBANKA_0607600
Spliceosome [BR:
pbe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PBANKA_0607600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
55148647
NCBI-ProteinID:
XP_034420577
UniProt:
A0A509ALW8
LinkDB
All DBs
Position
6:371352..372175
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AA seq
108 aa
AA seq
DB search
MSVLPGPTENINKDNKFMNDIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEF
IRDPNDSYVITEKSRNIGLIVARGTSVALITPVNGTQEISNPFISEEK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattaccagggcctacagaaaatatcaacaaggataacaaatttatgaatgat
ataaaaaaatttatgaaccaaaaaattagggtaaaattcgatggaggaagagaagttgtt
ggtaatttaattggtcatgatgcaatatttaatttagttctagacaaaactgaagaattt
atacgagacccaaatgatagttatgtaataaccgaaaaaagtaggaatattggcttaatt
gtagcccgaggaacttcggttgccctgattacccctgttaatggcactcaagaaatttct
aatccatttatatcggaagaaaaatag
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