KEGG   Plasmodium berghei: PBANKA_0707800
Entry
PBANKA_0707800    CDS       T01111                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein, putative
  KO
K12857  Prp8 binding protein
Organism
pbe  Plasmodium berghei
Pathway
pbe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PBANKA_0707800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbe03041]
    PBANKA_0707800
Spliceosome [BR:pbe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PBANKA_0707800
 Complex C
   U5 SnRNP specific factors
    PBANKA_0707800
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_RIG_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 WD40_like RMC1_N Beta-prop_Nup120_160 SVA Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 55148910
NCBI-ProteinID: XP_034420824
UniProt: A0A509AK43
LinkDB
Position
7:complement(324552..325520)
AA seq 322 aa
MEIVQSDGYVLDVDKRGDERKTGLFFQNMLINSHKGEVYSISFSYDGKFVASSSFDMTVM
IHNVYKECETVNVFRGHKNAVLQVKWTKDDTYLCSVSADHNSFLWDIENEQKIRSFKSHT
SVINSLNIIDYNTFVTCSDDGSLKFWDFRNKNCIYTIQDNFPLLCVCGNKKGDTIYTSSV
DNSIKIFDTKTYQLKDTLKGHTDYISGLDINNDETILASISADEKICFWDIQPFPCDDKL
LYSLNSPKYNIDYNLIRLAFNNDNLLACGSGDSYLYIYDYKQKNLKYTLPGHTSTINDVA
FHPVEEIVASCSSDCNIFLGEL
NT seq 969 nt   +upstreamnt  +downstreamnt
atggaaatagtacagtctgatggatatgtcctagatgttgataaaagaggtgatgaaagg
aaaactggattgttttttcaaaatatgctaataaatagccataaaggggaagtgtactca
ataagtttttcttatgatggtaaatttgtagcatcatccagctttgacatgactgtaatg
atacataatgtttataaagaatgtgaaactgttaatgtttttagaggacataaaaacgca
gtattacaagtcaaatggacaaaagatgatacttatttatgtagcgtatcggctgatcat
aattcttttctttgggatattgaaaatgaacaaaaaataagaagttttaaaagccataca
agcgtaattaatagcttaaatataattgattataatacatttgttacatgcagtgatgat
ggtagcttaaaattttgggattttcgaaataaaaattgtatatatactattcaagataat
tttccattattatgtgtgtgtggaaataaaaaaggagatactatatatactagttcagtt
gataatagtataaaaatctttgatactaaaacttatcaattaaaagatacattaaaagga
cacacagattatataagtggattggatataaataatgatgaaactatattagcttcaata
agtgctgatgaaaaaatatgtttttgggatattcagccttttccttgtgatgataaatta
ttatattctttaaattcaccaaaatataatattgattacaatttaataaggttagcattt
aataatgacaatttacttgcttgtggaagtggagatagctatttgtatatttatgattat
aaacaaaaaaatttaaaatatacattgcctggtcatacaagtacaataaatgatgttgcc
tttcatccagttgaggaaattgttgcatcatgctcctctgattgcaacatatttttaggc
gaattgtag

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