Plasmodium berghei: PBANKA_0709500
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Entry
PBANKA_0709500 CDS
T01111
Name
(RefSeq) ATP-dependent RNA helicase DHX36, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBANKA_0709500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbe03019
]
PBANKA_0709500
03012 Translation factors [BR:
pbe03012
]
PBANKA_0709500
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PBANKA_0709500
Messenger RNA biogenesis [BR:
pbe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PBANKA_0709500
Translation factors [BR:
pbe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PBANKA_0709500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_11
HA2_N
ResIII
nSTAND3
AAA_14
AAA_22
NPHP3_N
TsaE
ABC_tran
AAA_19
ATPase_2
VapE-like_dom
Flavi_DEAD
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
55148926
NCBI-ProteinID:
XP_034420840
UniProt:
A0A509AI29
LinkDB
All DBs
Position
7:365789..368355
Genome browser
AA seq
784 aa
AA seq
DB search
MKDLPILRYKNEIKEKLKNNNLIVIKGETGCGKTTQVPQIINELYFDKKENDDKDEKSNQ
NYSKKILVSLPRRVATITVAERVSKEMKRGNVGEYVGYSIRFKNVCSKKTKIKFVTDGIL
IREIMGDPLLKNYKFIILDEIHERSIRTDVLLGYTKILLEKRKNLKIILMSATFDINIFN
SFLGNPPIISIPHKIHKISIFYPKNVIEDYLLSIVCTILQIHFENSYTKKNMNSSEYYEH
DDLKNADQELCDHANISKNINNFNTQTSDFANECDENYNNIIGDILVFLPGQEEIEMVNI
MLKEKLKIIYKGILLKKLINDKKNTNINDDEDIITKFNYAMGSLHENPIDDISFHFGDIE
IIPDKIYTMKILQLYSSLPNKKQKMIFDPVSPNTRKVILSTNIAETSVTIPNIKYVIDSG
KAKVKFFDEKKGCSILKITKISKDSAIQRSGRAGREGPGKVYRIYTKEEYENMKSFLIPE
IFRSDLTQIYLELKAMNIKNPLNFNFPENPKKEFFIHSAKMLFKIKAIDVNNNLTELGKQ
LSLLPISPIYGNMLLASVSFNCIDEMATLIALLNCDSIFLNFNFYDENDGVDTNLTTTAS
KNEDNDELKISDKNKIISISRKKLIHPDGDHLTIIHAFYLWEQEITNSEKKQFCNMYGLN
NEVLINVQKIKKQLLEILSNKMGIKINKKLHMHKWDNIMMSLCKSCYFNVAKHISNSSLF
MNLVTKTKLRIHPSSTLFNSFNKPSFIFYSDVVQTKKLYARVVTKVNPEWLIKYVPNNFQ
ISKD
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttaccaatattaagatataaaaatgaaataaaagaaaaattaaaaaataat
aaccttatagttataaaaggagaaacaggatgtggaaaaacaacccaagtgccacaaata
ataaatgaattgtattttgacaaaaaagaaaacgatgataaagatgaaaaaagtaatcaa
aattattccaaaaaaatccttgtgtctttgccaagaagagttgctacgataactgtggca
gaacgtgtatcaaaggaaatgaaaagaggaaatgttggcgaatatgtaggttatagtata
cgatttaaaaatgtttgttcaaaaaaaacaaaaataaaattcgtaacagatggaatatta
ataagagaaataatgggggatccattattaaaaaattacaaatttattattttagatgaa
atacatgaaagatctataagaacagatgtattactaggatatactaaaatattattagaa
aaaagaaaaaatttaaaaattattcttatgtcagctacttttgatataaatatttttaac
agttttttaggaaatcctccaattatatcaattcctcataaaattcataaaatttcgatt
ttttatccaaaaaatgtaatagaggattatttattgtctattgtatgtacaattttacaa
atacattttgaaaattcctataccaaaaaaaatatgaacagttcagaatattatgaacat
gacgacctaaaaaatgcagatcaggagttatgtgatcatgcaaatatttcaaaaaatata
aataattttaacacacaaacttctgattttgcaaatgaatgtgatgaaaattataataat
ataatcggagatattttagtatttttgcctggacaagaagaaattgaaatggttaatatt
atgctcaaagaaaaactaaaaattatttacaaaggaatattattaaaaaagttaataaat
gataaaaaaaatacaaatataaatgatgatgaagatattataaccaaatttaattatgca
atgggatcacttcatgaaaatcctattgatgatatatcattccattttggtgatattgaa
ataattccagataaaatatatactatgaaaatattacagttatattcttcgctacctaat
aaaaaacaaaaaatgatttttgaccccgtctctcctaatacacgaaaggtaatcctcagc
acgaacattgccgaaacttccgtgacaattcctaacattaaatatgtaatagatagtggt
aaagcaaaggtaaagtttttcgacgaaaaaaaaggatgtagtattttaaaaattacaaaa
ataagcaaagattccgcaattcaacgaagtgggcgagctggtagggaaggaccaggaaaa
gtttatagaatatacacaaaagaagaatatgaaaatatgaaatcttttttaatacctgaa
atatttagatcagatcttacacaaatatatttggaactaaaagcaatgaacataaaaaac
ccactaaactttaactttccagaaaatcccaaaaaagaattttttattcattcagcaaaa
atgctatttaaaataaaagcaatagatgtaaataataatttgacagaattaggaaaacaa
ctatctttgctacctattagtcctatttatggaaatatgttgttagcatctgtttctttt
aattgtattgatgaaatggctacgttaattgcacttttaaattgtgatagcattttttta
aattttaatttttatgatgaaaatgatggagtagataccaatttgacaacaacggctagt
aaaaatgaagataatgatgaactcaaaataagtgacaaaaataaaataattagcatttct
agaaaaaaattaatacatccagatggggatcatctaacaataatacatgctttttattta
tgggaacaagaaataacaaatagtgaaaaaaaacaattttgtaatatgtatggattaaat
aacgaagttttaataaatgtacaaaaaattaagaaacaattattagaaattttatcaaat
aaaatgggaataaaaataaataaaaaattgcatatgcataaatgggataatattatgatg
tctttatgcaaatcttgttattttaatgttgcaaaacatatatcaaattcgtctcttttt
atgaatttagtaactaaaacgaaattacgcatacatccttcttctactcttttcaattct
tttaataaaccttcatttattttttattctgatgttgtgcaaacaaaaaaattatatgca
cgcgttgtcacaaaagtcaatcccgaatggctgatcaagtatgttcccaacaattttcag
atatctaaagattag
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