Plasmodium berghei: PBANKA_0716000
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Entry
PBANKA_0716000 CDS
T01111
Name
(RefSeq) structural maintenance of chromosomes protein 3, putative
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_0716000
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pbe00535
]
PBANKA_0716000
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
PBANKA_0716000
Meiosis-specific proteins
Cohesin complex and associated proteins
PBANKA_0716000
Proteoglycans [BR:
pbe00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
PBANKA_0716000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
Retrotrans_gag
Motif
Other DBs
NCBI-GeneID:
55148991
NCBI-ProteinID:
XP_034420905
UniProt:
A0A509AJX0
LinkDB
All DBs
Position
7:complement(585977..591864)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYIKQIKLKGFRTYKNETVIEFTKGINCIVGFNGSGKSNILMAIEFILSDMSEYKQVFLH
EGIGNAVRNCYVEITFDNSEKYFSMFKENEIKIKKVLENMKCEIYVNDKNISKSQYVELL
ESCGLCVNNLYNIIKQGQIIKLSNMKEEEILNYLKSILGAKIFEEKKKDGLSMLRECDAK
KETIQKEFNEMNTKLETLQEEFQKFLEYKKLEKEKVHLEYFLNEINYKNIYEETQILKSK
LQELKNKTQDEDNALNLSNTSKSEYTEKLNKMKLEIVTIQNEFDRTISEEIQNKRNIIQL
EILIDEKKKEKSLKESKNKNQIENINQINEFILRVNEKLRGLKDVITLKEKEIENKNNEI
NMLLSKNMPKNSNDANYSHNVKQIEKMINDVNTELSGLEKEIMKNENYLKELKEESKKLS
KDVKENEHLSEKYITEINELNKKSENCVEEKRKFQRKISEGTSNLNNIKSQLIEVNDKYE
EIVKSSNKEIVKMVDIILKESNINKESILGFLIDNINVDKNYIKAVDTILESHYFTLIVE
DMKTAKHIVEFIEKKREEKTNKEFNFRDFFFGKLTIVPLLNVKKYNDFTYPNDKNIIPLI
NCVSYNSKIYEFLKTILFKTIIVKSLESCQNYLEDNYNCVNIDGDYLSKHGFVYGGYNKK
KYGVYTVYNKLKELREEEKKEKTNIDNFSNNIEQLDEELRIIYDQKSTLLGQKNGCLTSL
NSITNSIHINDDNIRKANEKIKSLQEKKESIEDYKNQLKMQILQLRNHSLNPDESKKGEN
DITSINDEVKKLKEDLNKVRNEYDDFKNKLELLYQKRNENDSNIYMKDYEDIEKEKKYYE
EKIKQINKEMEIVKSNIDKILINEKKHKKKILDLCHQMNQTNEELRILEGKEENIRKKKI
ILPQGIKNLEDYQSYDKHQLSSKLKSITLELKQYSNINEKAGDRLNILMSDFNELKKRSE
EINTSYKNIKDMIQHIGKKKDEALEATYIKINKYFSEYFSLLFKNRKASLMLKRMGEKEY
KERLNEMNQKKRIRKKYIDDEAYIDKITGISINITSNEDEKMNYTIQELSGGERSIVAIC
LFLCLNKIDNFSFFFFDEIDAALDTVHRDNLSILLKELANKGTQFIITTFRKELLEYCEN
MYIVKIVDRESYITKGTKKEAYEIISIEEKNAIEN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaacaaataaaattaaaaggtttccgaacatataaaaatgaaactgtcatc
gagtttacgaaaggaattaactgcatagttggatttaatggatcggggaaaagcaacatt
ttaatggcaattgagtttatattaagtgatatgtcagaatataaacaagtttttttacac
gaaggtataggtaatgcagttagaaattgctatgttgaaataacttttgacaactctgaa
aaatattttagcatgtttaaagaaaatgaaattaagataaaaaaagttttagaaaatatg
aaatgtgaaatatatgttaatgataagaatataagtaaaagtcaatatgtagaattgtta
gaaagttgcggtttgtgtgttaataatttatacaatataattaaacaggggcagataatt
aaattaagtaatatgaaagaggaagaaatattaaattatttaaaaagtatattaggtgcc
aaaatatttgaagaaaaaaaaaaagatggtttatctatgctaagagaatgtgatgctaaa
aaagaaacaattcaaaaagaatttaatgaaatgaatacaaaattagaaactttgcaagaa
gagtttcaaaagtttttagaatataaaaaactcgaaaaagaaaaagtacatctagaatac
tttttaaacgaaattaattataaaaatatttatgaggaaacacaaatattaaaatcgaaa
ttacaagaattaaaaaataaaacacaagatgaagacaatgctctaaatttaagtaacact
tcgaaatcagagtatacagaaaaactaaataaaatgaaattagaaattgttacaattcaa
aacgaattcgatagaacaatatcagaggaaatacaaaacaaaagaaatattatacagtta
gaaattttaatagatgaaaagaaaaaagaaaaatctttgaaagaatcgaaaaataaaaat
caaattgaaaatataaatcaaattaatgaatttattttaagagttaacgaaaagttacgg
ggcctcaaagatgttattaccctaaaagaaaaagaaattgaaaataaaaacaacgaaata
aacatgttgttatcgaaaaacatgccaaaaaattcgaatgatgctaattattctcataac
gttaaacaaattgagaaaatgataaatgatgttaatacggagttatctggtttagaaaaa
gagataatgaaaaatgaaaattatttgaaagaattaaaagaggaatcaaaaaaattgagc
aaagacgttaaggaaaacgagcatttatctgaaaaatatataaccgagataaatgaactt
aacaagaaatcagaaaattgtgttgaagaaaaaaggaaattccaacggaaaatatcagaa
ggaacatcaaatttaaataatataaaaagtcagctgattgaagtaaatgataaatacgaa
gaaattgtaaaaagttcaaataaagaaattgttaaaatggtggatataattttaaaagaa
tcaaatataaacaaggaaagcattttaggatttttgatagacaacattaatgtcgacaaa
aattacataaaagctgttgacacaatcttagaaagccattattttactttaattgttgaa
gatatgaaaacagccaaacatatagtagaatttatagaaaaaaaacgcgaagaaaaaaca
aataaagaatttaattttagagattttttttttggaaaattaactatagtaccattatta
aatgtaaaaaaatataatgattttacttatccaaacgataaaaatattattcccctaatt
aactgtgtaagttataatagtaaaatatatgaatttttgaaaaccattttatttaaaact
attattgtgaaatctttggaatcatgtcaaaactatttagaggataattacaactgtgtc
aatatcgacggagattacctaagcaaacacggctttgtatatggtggatacaataaaaaa
aagtatggagtgtatacagtttataataagttaaaagaattgcgagaagaagaaaaaaaa
gaaaaaacaaatattgataatttttctaataatattgaacaactagatgaagagttaaga
attatttatgaccaaaaatcaactttgttgggtcaaaaaaatggatgtttaacatcactt
aattcaatcacaaatagtatacacataaatgatgataacattcgaaaagccaatgaaaaa
attaaaagtttacaagaaaaaaaagaaagcattgaggattataaaaaccaattgaaaatg
caaatattacaattgcgaaatcatagtttaaatccagatgaatcaaagaaaggagaaaac
gatattacttctataaatgatgaggtgaaaaaattaaaagaagatcttaataaagttaga
aatgaatatgacgattttaaaaataaattggagttgttatatcagaagagaaatgagaac
gattcaaacatatacatgaaggactatgaagatatcgagaaagagaagaaatactatgaa
gaaaaaataaaacaaataaataaagagatggaaattgtgaaatccaacattgataaaatt
ttaataaatgaaaaaaaacataaaaaaaaaatattagacttatgccaccagatgaaccaa
acaaacgaagagcttagaattttagagggaaaagaagaaaatatcagaaaaaaaaaaatt
atattgcctcaaggaataaaaaatttggaagactatcaaagttatgataaacaccaacta
tcttcgaagcttaaatcaattacactcgaattaaaacaatattcaaacataaacgaaaaa
gcaggagatagattgaatatattaatgagcgattttaatgaattaaaaaaaagaagcgaa
gaaataaacacgtcttataaaaatattaaagatatgatacaacatattgggaaaaaaaaa
gatgaagcccttgaagctacatacataaaaataaataaatatttttctgaatatttttca
ttactttttaaaaatagaaaagctagtttgatgttaaagcgaatgggcgaaaaagagtac
aaagaaaggttaaatgaaatgaatcaaaaaaaaagaataaggaaaaaatatatagatgat
gaagcatatatagacaaaataacgggaatatccataaatataacctcaaatgaggacgag
aaaatgaattatacaattcaagaattgtcaggaggagaaagaagtattgtagctatttgc
ctattcttatgtttaaacaaaatcgataacttttcttttttcttttttgatgaaatcgat
gctgcccttgatacagttcacagggataacctctcaatactgctaaaagagctagctaat
aaggggacacaatttattattacaacgtttaggaaagagctattggaatactgtgaaaat
atgtacattgttaaaatcgtagacagggaaagttacataacaaaaggaacgaaaaaggag
gcttacgaaatcattagtattgaagaaaaaaatgccatagaaaattag
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