Plasmodium berghei: PBANKA_0819500
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Entry
PBANKA_0819500 CDS
T01111
Name
(RefSeq) ATP-dependent DNA helicase Q1, putative
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBANKA_0819500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_0819500
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_0819500
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBANKA_0819500
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
PBANKA_0819500
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
PBANKA_0819500
Bloom's syndrome complex (BTR)
PBANKA_0819500
FA (Fanconi anemia) pathway
PBANKA_0819500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
55149267
NCBI-ProteinID:
XP_034421167
LinkDB
All DBs
Position
8:779878..781779
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AA seq
633 aa
AA seq
DB search
MGEIKVKNGKLEFPRKNDEDNTKFDLLDLYKKKYQKIDINKAKNVLNDYFNYTNFKEKQI
ECLNGIKNFEHILNIMPTGGGKSLIYQIMPLIVDGISIVISPLISLIQDQIKSLRNKNIF
SETINSSLNKKENQNILAMLRSFNDCNIKVLYITPETATSPQFISILEELYLNGKISLIS
IDEVHCISTWGCDFRKSYRHLSKLLNTCPYVRIYSCTATATKHVERDIITNLGFHDSNNN
KNDNDKETINIYKGLKIVRTSFNRPNIKYIIIYSDLLKIDKKESICDIVREKRNERKTGI
IYCFKRKTCDMISKYLRENGIQSLSYHAGLTNNARKQIQEKWINGTIKILVATIAFGMGI
DRKDVSYIIHFNLPKSIENYYQESGRAGRNGNIAFCYLYYSKEDVEKLAFIIKGCYSNLD
AYNPNMEKKFEKEMHNLECVHNLCITQKCIRTQILNYFGETYQKDNHNNKDRKSDINYCC
SYCFDIKGSADKIRQINNLYQQENWNPNFQRKTNEYNNVASYQYSHKGKKHKLSGNDSDS
NQYEEIGFDDYKLSNNRIKGFVPFQKASSIISKDIRAKGIVEVMKELERREEMAEIKLQE
KNDRIPKVSRLIPTCVNIKKKNIISSFKVPRKL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaataaaagtgaaaaatggtaaactggaatttccaagaaagaatgatgaagat
aataccaagtttgacttgctggatttatataaaaaaaaatatcaaaagatagacataaat
aaagccaaaaatgttttgaatgattattttaattatacaaattttaaagaaaaacaaata
gaatgcttaaatggaattaaaaattttgaacacattttaaatattatgccaacagggggt
ggaaaatctttaatttatcaaattatgccattaattgttgatggtataagtattgtaatt
agtcctttaatttcattaatacaagatcaaataaaatctttaagaaataaaaatattttt
tctgaaacaattaatagttctttaaataaaaaagaaaatcaaaacatattagctatgctg
agaagtttcaacgattgtaatataaaggttttatatattacccctgaaacagctacaagt
ccacaatttatatcaattttagaagaactctatttaaatggaaaaatatctttaatatca
atagatgaagtacattgtattagtacctggggttgtgattttagaaaaagttatagacat
ttaagtaagttactaaatacttgcccatatgttagaatatacagttgtactgctactgca
acaaagcatgtggaaagagatataattactaacttaggatttcacgattcaaataataac
aaaaatgataatgataaggaaacgataaatatatataagggactgaaaattgtaagaaca
tctttcaatagaccaaacattaaatatataatcatttatagcgatttactaaaaattgat
aaaaaggaaagtatatgtgatatagttagagaaaaaagaaatgaaaggaaaacaggaatt
atttattgctttaaaagaaaaacatgcgatatgatttcaaaatatttaagagaaaatgga
atacaatcattaagttatcatgcaggtttaactaataatgcaagaaaacaaattcaagaa
aaatggataaatggaactataaaaatattagtagctacaatagcatttgggatgggaata
gacagaaaagatgtttcatatattatacattttaatttacctaaatcgatagaaaattat
tatcaagaatcgggtagagctggtagaaacggtaatatagcattttgttatttatactat
tctaaggaagatgtagaaaagttagcatttataataaaaggatgttattcaaacttagat
gcgtataatccgaatatggaaaaaaaattcgaaaaagaaatgcataatttggagtgtgtt
cacaatttatgtattactcagaaatgtatacgaactcaaattttaaattattttggagaa
acttatcaaaaagataatcataataacaaagatagaaaatctgatattaattattgctgt
tcatattgttttgatattaaaggctccgcagataaaataagacaaataaacaatttatat
caacaagaaaattggaaccccaattttcaaagaaaaacaaatgaatataataatgtagca
tcttatcaatattctcataaagggaaaaaacataagttaagtggcaacgattctgattct
aatcagtacgaagaaatcggatttgatgattataaattaagtaataataggattaaagga
ttcgtaccttttcaaaaagcatcctcaattatatcaaaagatatacgagcaaaaggaata
gttgaagtcatgaaagaattagaaagacgcgaagaaatggcagaaattaaattgcaagaa
aaaaatgatagaattcctaaagtaagcagattaatacctacctgtgttaatataaaaaag
aaaaatataatatcatctttcaaagttcctcgaaagctataa
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