Plasmodium berghei: PBANKA_0823900
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Entry
PBANKA_0823900 CDS
T01111
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3, putative
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pbe
Plasmodium berghei
Pathway
pbe03020
RNA polymerase
pbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PBANKA_0823900
09124 Replication and repair
03420 Nucleotide excision repair
PBANKA_0823900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_0823900
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_0823900
Transcription machinery [BR:
pbe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PBANKA_0823900
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PBANKA_0823900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
DUF6864
Urocanase
Motif
Other DBs
NCBI-GeneID:
55149311
NCBI-ProteinID:
XP_034421211
UniProt:
A0A509AJL6
LinkDB
All DBs
Position
8:complement(936405..937412)
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AA seq
335 aa
AA seq
DB search
MMMMMNEDNSKKNKIEIKSISKNEMEFTLYNSNAALANALRRIMLSEVPTLAIDIVNVYE
NTSPFHDEFIAHRIGLIPIDSRNIKSYEFRERCKCKETCSRCTVQYIIEVKCNNANKINV
SHYDIEALDHEPNIPMPIPNDNKNNNIEKMENAIPIVTLSKNQTIHMKLTATKGIGKMHA
KWIPANVSYIIDHKIVINNHEVDKMSKEHKLLIANNLNPDFYILKEMDDDRNVELRLSEN
MSVVMAESCRDALNELGYNKDIVKIIYDETKFHFKIESVGSMPPEQIVEMAIEILESKLK
DLEPQIKASFYSIEEVAKQLKEQGVSLYGIQLDLE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgaatgaagataattcaaaaaaaaacaaaatcgaaataaaaagtata
tcgaaaaatgaaatggaatttacattatataatagtaacgcagcattagcaaatgctctc
agaagaattatgttatcagaagtgccaacattagcaattgatatagttaatgtttatgaa
aatacaagtccatttcatgatgaattcatagcccatagaataggtttaatacctatagat
agtagaaatataaaaagttatgaatttagagaacgatgtaaatgtaaagaaacgtgctct
agatgtactgtccaatatatcattgaggtaaaatgtaataacgctaataaaataaatgta
tcacattatgatatagaagcactagatcatgaacccaatattcctatgcctatacccaat
gataataaaaataataatattgaaaaaatggaaaatgctatacctattgtcacattatct
aaaaaccaaaccatacatatgaaattaacagccacaaaaggaattggaaaaatgcacgca
aaatggatacccgctaatgtatcatatataattgatcacaaaatagtaattaataatcat
gaagtggataaaatgtcaaaagaacacaaattattaatagctaataatttaaatcctgat
ttttatatattaaaagaaatggatgatgatagaaatgtcgaattacgattaagtgaaaat
atgtcagttgttatggcagaaagttgtagagatgcattaaatgaattaggatataataaa
gatattgttaaaattatttatgatgaaactaaatttcattttaaaattgaatctgttggt
tcaatgcctcctgagcagattgttgaaatggctatagaaattttagaaagtaagttaaaa
gacttagagccacaaattaaagcttcattttattccattgaagaagttgcaaaacaacta
aaagagcaaggtgtatccttatatggaattcaattggatctagaataa
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