Plasmodium berghei: PBANKA_0918800
Help
Entry
PBANKA_0918800 CDS
T01111
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase, putative
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbe03009
]
PBANKA_0918800
Enzymes [BR:
pbe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
PBANKA_0918800
Ribosome biogenesis [BR:
pbe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PBANKA_0918800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Methyltr_RsmF_N
Motif
Other DBs
NCBI-GeneID:
55149644
NCBI-ProteinID:
XP_034421539
UniProt:
A0A509AJS5
LinkDB
All DBs
Position
9:700128..701981
Genome browser
AA seq
617 aa
AA seq
DB search
MDNEDNKSNESVDIEIVKTEDKEKSFPLFDNDHFEINKSDEEYDLENDSEMDNQDEEDEV
IPNDEAELSSNISYDDMNSNEEEEEEEEEEEGEIEEEGEGENKLRDMGKKMKNIVGRKKK
YLNKKENIYYDGLGIYKNDQMMNNDDIEDRIKYLLLLLSDPEKLNNPNLIKIEKREIIKE
ILYYYSYYYEYTKEMIKYLYYLFDIKELYLFLEINNMPKEIHLRTNTLKITRTNLLKILK
NKNIAIQDGSNWNNVDITLTDTSSNVGSLNEYLYGYYIIQSSSSLIPVLELNIKENELVL
DMCAAPGGKCTFICTIQKNKGIVYANDINKLRCKAIEAHAARMGINNLIITSFDSLKINK
YFKFKFDKILLDAPCSGTGVVNKNKNARRKTIKEIRDLSQKQRKLLNNAIDMVKNGGIVI
YSTCSITVEENEQVINYILKKRDVNLLPIDINIGDPGIIHYRKKQFSSKISLCKRIYLHK
HNHDNFFVAKLVKRSNAKLGQKGDEKQNHETNIKSAKVKKKNNKNANEQNKDDNNEEKRT
LHNNKMGEKNKHLKKKINKAFENMGRGERDTSNDQKKVLKKGFRQNNEKKKKFLNKNKFN
GNNKRGGKNSKKGLKSH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaagataataaatcgaatgaatcggttgacatcgagattgtgaaaaccgaa
gataaagaaaagtcatttcccctttttgacaacgatcattttgaaataaataaaagtgat
gaagaatatgatctcgaaaatgacagtgaaatggataatcaagatgaagaagatgaggtc
atacccaatgatgaagctgaattatccagcaacatttcatatgatgacatgaacagtaat
gaagaagaagaagaagaggaagaagaagaagagggagaaattgaagaagagggagagggc
gaaaacaaattaagagatatggggaaaaaaatgaaaaatattgttgggagaaaaaaaaaa
tatttaaataaaaaagaaaatatatattatgatggtttaggtatatataaaaatgatcaa
atgatgaataatgatgatatagaagatcgaataaaatatttattattattattgagtgat
ccagaaaaattaaataatccaaatttaataaaaatagaaaaacgtgaaataattaaagaa
atactttattattattcttattattatgaatatacaaaggaaatgataaaatatttatat
tacttatttgatataaaagaattatatttatttttagaaattaataatatgcctaaagaa
atacatttaagaactaatacgttaaaaataactagaacaaatttattaaaaatattaaaa
aataaaaatatagcaatacaagatggatccaattggaataatgtagatataacattaaca
gatacaagttcaaatgtcggatcattaaatgaatatttatatggatattatattatacaa
tcttcttcatctttaattccagtcttagaattaaatataaaagaaaacgaattagtatta
gatatgtgcgcagcgcctggaggaaaatgcacatttatatgtacaatacaaaaaaataaa
ggaatagtatatgctaatgatattaataaattgcgatgtaaagctatagaagcacatgct
gcaagaatgggaataaataatttaattattacatcttttgattccttaaaaattaacaaa
tattttaaatttaaatttgataaaatattattagatgccccttgtagtggtactggtgtt
gtaaataaaaataaaaatgcgagaagaaaaacaattaaagaaataagagatctttctcaa
aaacaaagaaaattattaaataatgccattgatatggttaaaaatggaggtattgttata
tattcaacttgtagtataacagttgaagaaaatgaacaagttattaattatattttaaaa
aagagagatgtgaatcttttaccaattgatataaatataggtgatccaggaataattcat
tatagaaaaaaacaattttcatcaaaaatttctctatgtaaaagaatatatttgcataaa
cataatcacgacaatttctttgttgcaaaacttgtgaaacgctcaaatgctaagttaggg
caaaaaggagacgaaaaacaaaatcatgaaacaaatataaaatctgcaaaagttaaaaaa
aagaataataaaaatgccaacgaacagaataaggatgataataatgaagaaaaaaggacc
ctacataataacaaaatgggggaaaaaaataaacatctgaaaaaaaaaataaataaagcc
ttcgaaaatatgggaagaggagaaagagatactagcaatgatcaaaaaaaagttctcaaa
aaaggctttaggcaaaataatgaaaaaaaaaaaaaatttttaaataaaaataaatttaat
ggaaataataagaggggtggtaaaaactccaaaaaagggcttaagtcacattaa
DBGET
integrated database retrieval system
