Plasmodium berghei: PBANKA_0923900
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Entry
PBANKA_0923900 CDS
T01111
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1, putative
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pbe
Plasmodium berghei
Pathway
pbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBANKA_0923900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbe03019
]
PBANKA_0923900
Messenger RNA biogenesis [BR:
pbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PBANKA_0923900
mRNA degradation factors
5'-3' decay
Lsm complex
PBANKA_0923900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
55149694
NCBI-ProteinID:
XP_034421589
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All DBs
Position
9:858899..859759
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AA seq
142 aa
AA seq
DB search
MEQIFNPLWLSSFEEDIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPEQNY
FSDVYVGNLIIRGDNIAYFGSIDESKYEKMFNYSQKDINENDQGGNLYEQNKKEDIILNY
KPINQILKYIDKTNNDSTIFEN
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatattcaacccactatggctaagtagctttgaagaagatatagatacatat
atttttatttcgtcgagggataataaattatatttaggtatactaagaacatatgatcaa
catggaaatatatttttaacacactgcgttgaaaaaattatagtgcctgaacaaaattat
ttttctgatgtttatgttggaaatttaataattagaggagataatattgcatattttgga
tcaattgatgaaagtaaatatgagaaaatgtttaattactctcaaaaagatataaatgaa
aatgatcaagggggaaatttatatgaacaaaataaaaaagaagatataattcttaattat
aagcccataaatcaaattttaaaatatatcgataaaacaaacaacgatagtactattttt
gaaaattag
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