Plasmodium berghei: PBANKA_1007200
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Entry
PBANKA_1007200 CDS
T01111
Name
(RefSeq) replication protein A1, large subunit, putative
KO
K07466
replication factor A1
Organism
pbe
Plasmodium berghei
Pathway
pbe03030
DNA replication
pbe03420
Nucleotide excision repair
pbe03430
Mismatch repair
pbe03440
Homologous recombination
pbe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBANKA_1007200
03420 Nucleotide excision repair
PBANKA_1007200
03430 Mismatch repair
PBANKA_1007200
03440 Homologous recombination
PBANKA_1007200
03460 Fanconi anemia pathway
PBANKA_1007200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbe03000
]
PBANKA_1007200
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_1007200
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1007200
Transcription factors [BR:
pbe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PBANKA_1007200
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PBANKA_1007200
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PBANKA_1007200
MMR (mismatch excision repair)
PBANKA_1007200
DSBR (double strand breaks repair)
HR (homologous recombination)
PBANKA_1007200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
55149991
NCBI-ProteinID:
XP_034421872
UniProt:
A0A509AKJ9
LinkDB
All DBs
Position
10:complement(344589..348101)
Genome browser
AA seq
1170 aa
AA seq
DB search
MNKNEDILSKATPNFIYKFFTEPNSTEALKWLNSEVNLICFSQMNAGGNQVFLKVIDGSI
PPQYYAIVHLGVEDNGNMDPPISYVKKIIKIQKFSITNYYGKLFILAKKVTIYLNIESFD
IEDLFKKYHLQSISYLLLNAQNDYNGSNDQRHPTSNRTRDDSSYTCEGYNNNNNDSNDNY
PKYNNTPPTNYSQRNNHNGDNPRGFTTPYKYDDRYRGNNNKECNNNWQSSKNYNKIDDEN
YEMNYRNPNMRITNDPSAKNNMSDDYSEPYNNKENMNFREDPSRYGPNGRNGYNNAHNNN
ENNNYYNRGDDSENNMGLNNRSRAPYNEYQDYNNNINSKNDGRLITQEKNINTCKMNLEY
TNNRNYTTSYDHNHTFENDQYNNNNNNKSKTHNININPNAHKTGKYDMHAYKMRDDGDHG
DAGYYSGDNNRNSNNNSYQKNLEQGYLKSKSSGSLPLEGELSEIAGPREYKYGSSNGRYS
ERLGGNVMDNYRRNKCEMMLGENRQRDFHGNDNYYIERDNSDGFTKSANNRLNGNIKENA
MYRERSVDNYNSHSDNNMNMGSSIYGTEKENIHIAKKGNCDNDEMIEERKRAVMAIEINN
NGITRNPDLEIDRTRCNTYEKAENSNFNQRGDKKGSYVQNVEDCSNSINGSMLYMNETNE
TLSNFDDLNERKKVNETKLLKENNLNRNNRKCNPYPNSAVIKINDGILMPINKLSQYSTK
WIIKARVQSKDNIRKFYTGNKEGKVFNIELCDESGEIKVNVFGKAVDKWYDYLEVGKIYK
ISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFYPINEIKANLNTG
TLVDVIGVVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWGENAVKMEEMNIT
ENCIICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLKNWWINNKKNVYNTINLTTT
TSNNNMLNLESQKTIQEIKKNVNLANEEVLSGKGIIFTTFGFIDHIYNAIPVYSACPNCN
KKMVATVIEDGEEDMDQNVSESMYCAKCNKNNIPVYNYSINLKITDNTDSLRVSAFANSA
KTIMNGLSAEEFMKLRQEYISQENIENFDLIEKAKLNEFFFRIKAYMTSHMDEIKKNYTI
LETIPLSKLLVDSCRYLIKEIKLATEDIQE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacgaagatattttatcgaaggccacaccaaattttatatacaagtttttt
acagaacctaattcaactgaagcattaaaatggctaaattctgaagtgaatttaatatgt
tttagtcaaatgaatgccgggggtaatcaggtatttttaaaagtaattgatggaagcatt
cccccacaatattatgctattgtccatttaggtgtcgaagataatggaaatatggatcct
ccaatatcttatgtaaaaaaaataattaaaatacagaaattttctataacaaattactat
ggaaaactttttattttagcaaaaaaagttactatttatttaaatattgaaagttttgat
atagaagatttatttaaaaaatatcacttacaaagtatatcttatttgcttttaaatgca
caaaatgattataacggttctaatgatcaacgacatccaactagcaatagaactagggat
gacagtagctatacatgtgaaggatataataacaataataatgacagtaatgacaactat
cctaaatataataataccccgcctactaattatagccaaagaaataatcacaatggggat
aatccaagaggattcaccacgccctataagtacgatgataggtataggggaaataataac
aaagaatgtaataataattggcaaagttcaaaaaattataataaaatagatgatgaaaac
tatgaaatgaattatcgaaatcctaatatgaggataacaaatgacccatctgctaaaaat
aacatgtcagatgattatagtgaaccttataataacaaagaaaatatgaactttagagaa
gatccttcacgatatggtcccaatggtcgaaatggttacaataatgcccataataataat
gaaaataacaattattataatagaggtgatgatagtgaaaacaatatgggactaaataat
agatcgagagcaccctataatgaataccaagattataacaataatataaatagtaaaaat
gatgggagattaataacgcaagaaaaaaatataaatacatgtaaaatgaatttggaatat
actaacaacagaaattatacaactagttatgaccataatcatacatttgagaatgatcaa
tacaataataataataataataagagcaaaactcataacatcaatataaatccaaatgca
cataaaactgggaaatatgatatgcatgcttacaaaatgagagatgatggtgatcatgga
gatgctggatattatagtggtgataataatagaaatagtaataacaatagttatcagaaa
aatttagagcaaggctacttaaaatccaaatcatcagggtccttgccacttgagggtgaa
ctaagcgaaatagctggacctcgtgaatataaatatggatcaagcaacggaagatatagt
gaaagactaggaggaaatgtaatggataattacagacgaaataaatgtgaaatgatgctt
ggagaaaataggcaacgtgattttcatggaaatgacaattattacattgaaagggataat
agtgatggttttacaaaaagtgccaataatagattaaacggaaatataaaagaaaatgca
atgtatagagaaagaagtgtcgataattataattctcatagcgataataatatgaatatg
gggagtagtatatatggaaccgaaaaagaaaatattcacattgctaaaaaggggaattgt
gacaatgatgagatgatagaagaaagaaaaagagctgttatggcaatagaaataaataat
aatggaattactcgtaatcctgatttagaaattgatagaactcgatgtaatacttatgaa
aaggcagaaaattctaactttaatcaacggggtgataaaaaaggtagttacgtgcaaaat
gtagaagattgttctaatagtataaatggcagtatgctttatatgaacgagacaaacgaa
acgctaagcaactttgatgatttaaatgagagaaaaaaagttaatgaaacaaaattatta
aaagaaaacaatttaaatagaaataacagaaaatgtaatccttacccaaatagtgcagtt
ataaaaataaacgacggtatattaatgccaataaataagctatcacaatattctacaaaa
tggataatcaaagctagagttcaatcaaaagataatataagaaaattttatactgggaat
aaagaagggaaagtatttaacattgaattatgtgacgaatctggggaaataaaggtaaat
gtttttgggaaagctgtagacaaatggtatgattatttagaagttggtaaaatatataaa
ataagtaaaggaaatataaaaagtgctaataaaaaatttaatacattaaaacatgattgt
gaaataactttagatgaaaattcaattttagaattattagaagaaaatgatatgaatata
ccaaaatatatttataatttttatccaattaatgaaataaaagctaatctgaatacagga
acattagtagatgtaataggggtagtattaagttttcaagagctaaatcaaatccttatc
aaaaaaactgggcaatacaaagaaaaaaaggatttgatgctaattgacgaaacaaatgaa
actattaatgtaacactttggggtgaaaacgctgtaaaaatggaagaaatgaatataact
gaaaattgcattatatgttttaaatgcttaaaagtaggtgaatggcaagggaaaaaatta
gaatcgcatccaaaaacgaaagtagaaataaatccagaattagataaagcatatacttta
aaaaattggtggataaataataaaaaaaatgtatataatacaataaatttgactactact
acttcgaacaataatatgctaaatttagaatcacaaaaaactatacaagaaattaaaaag
aatgtcaatttagcaaatgaagaagtactatccggaaagggaataatttttacaactttt
gggtttatagatcacatatacaatgcaatacccgtatattcggcttgtcctaattgtaat
aaaaaaatggtagcaacggttatagaagatggagaggaagatatggaccaaaatgtttca
gaatctatgtattgtgctaaatgtaataaaaataatatacccgtatataattattctatt
aatttaaaaattactgataatacagattctttaagagtatctgcctttgctaattctgct
aaaactattatgaatggactatcagctgaagaatttatgaagttaaggcaagaatatatt
tctcaagaaaatattgaaaactttgatcttatagaaaaagcaaagctcaacgaattcttt
ttcaggatcaaagcatatatgacttctcacatggatgaaataaaaaaaaattacactatt
cttgagactatacccctaagcaaacttttggttgatagctgtcgctacttgatcaaggaa
atcaaactagccacagaagatatccaagaataa
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integrated database retrieval system
