Plasmodium berghei: PBANKA_1007800
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Entry
PBANKA_1007800 CDS
T01111
Name
(RefSeq) exosome complex component RRP4, putative
KO
K03679
exosome complex component RRP4
Organism
pbe
Plasmodium berghei
Pathway
pbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBANKA_1007800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbe03019
]
PBANKA_1007800
Messenger RNA biogenesis [BR:
pbe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PBANKA_1007800
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PBANKA_1007800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
3HCDH
DUF2110
Motif
Other DBs
NCBI-GeneID:
55149999
NCBI-ProteinID:
XP_034421878
UniProt:
A0A509AJH0
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All DBs
Position
10:367145..368125
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AA seq
326 aa
AA seq
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MDLIVITPYDEELDDIEELNSKILALEMIKHNKSNVNKNADNSCPNIKKLVLPGEAVLEK
KDKPRFLKGSGLYEEEENFCACLLGSVNYINKLVYVEPLRGKYTGSVGDLLVGKIKDINN
DKWVVEIGSYCRALLSITQTNISLFSQRIRLYNDVINMINIYKPNDVIACEVQRILTDGC
IILHTRSSIYGKLSNGILITVPQTLVQNQKKHIFVFPCNVQIILGMNGFIWISSPIKKSK
DTNPNSIDEDIEGNKFEEVDDTTRKNISIISNIIKLLAKYHININYDIITKIYMQYTSNK
SNTPSYILKPYVSDSYLFSYLENFTK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatttaattgtcatcacgccatatgatgaagaactggatgatatcgaagaattaaat
agtaaaatattggctcttgaaatgataaaacataataagtcaaatgtaaacaaaaatgca
gataattcatgccctaatataaaaaagttagtgttaccaggtgaagcagtattagagaaa
aaagataaaccccgattcttaaaggggagtggcttgtatgaagaagaagaaaatttttgt
gcatgcctattgggaagtgtaaactatataaataagttagtatatgtagaaccattgcgg
gggaaatatacaggttcagtaggtgatttattagttggaaaaataaaagatataaataat
gataaatgggttgtagaaataggatcatattgtagggccttattatcaataacacaaact
aatataagcttatttagtcaaagaatacggttatataatgatgttataaatatgattaat
atatataagcccaatgatgtcattgcatgtgaagttcaaagaatattaacagatggttgt
attattttgcatactagatcgtctatatatggtaaattatctaacggaattttaattaca
gttccacaaacattagtgcaaaatcagaagaaacacatcttcgtattcccatgtaatgta
caaataattttaggaatgaatggattcatttggatttcttctccaattaaaaaatcgaaa
gacacaaatccaaacagtatagatgaagatattgaagggaataaatttgaagaggtagat
gatactactcgaaaaaatattagtatcattagtaatattattaaattactagctaaatat
catattaatattaattatgatattattactaaaatatatatgcaatatacttcgaataaa
agcaatacacccagttacattttaaagccatatgtatctgattcttatctatttagttat
ctagaaaattttactaagtaa
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