Plasmodium berghei: PBANKA_1011400
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Entry
PBANKA_1011400 CDS
T01111
Name
(RefSeq) DNA topoisomerase 2, putative
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_1011400
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_1011400
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PBANKA_1011400
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Topoisomerases
PBANKA_1011400
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
PBANKA_1011400
Centrosome formation proteins
Centriole proteins
PBANKA_1011400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Microp_apicomplexa_8
Motif
Other DBs
NCBI-GeneID:
55150034
NCBI-ProteinID:
XP_034421913
UniProt:
A0A509AJ99
LinkDB
All DBs
Position
10:522597..527396
Genome browser
AA seq
1472 aa
AA seq
DB search
MSKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWIWNKEKNRMVQKNITYVPGLY
KIFDEIIVNAADVKAREKEKSENPMTCIKIEINKEQKRISVYNDGEGIPVDIHKEMNIYV
PHMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFTVQCGDSSRKREFKMTWSQN
MSKFSEPHIKNYNGKDYVKVTFKPDLDKFGMAELDDDIECLLHKRVYDLAGTCNVRVYLN
GTRLPVKDFKSYVDLYLRDNSHPNTNPSVSKNALNGNTDASVNKTIDNLDVSIFHDNGGG
AGDITPSKTTEENGNSNFNNNKYEEEIVKIHEKQHRWEIVISKTDGSQFQQVSFVNSICT
TKGGTHVSYIVDQLLNSLSKKANAKNKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKE
TLTTKQSKFGSKCILTDKTINNVLKSSILSNILLWAQAKAQVELRKKMKAGSSKARERII
GIPKLEDANDAGSKYSQECTLILTEGDSAKTSCLAGLSIVGRDRYGVFPLKGKLLNVRDA
SFKQLMDNKEIQNIFKIMGLDITDKNKQDIKGLRYGSLMIMTDQDYDGSHIKGLLINMIH
KFWPSLLKHKGFLCEFVTPIVKVQKGNQELSFFTIAEYEQWKENTNLVGWKIKYYKGLGT
STDKEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFILGSYVDHKE
KDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLRNECKVAQLVGY
IAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAARYIFTKL
ASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSFIPNYNYK
DIINNIKKYIDKEPLVPMVPWYKDFKGRIEPNGKSGYETIGIINKIDDETLEITELPIKR
WTQDYKEFLEELLTDEKNQLIIDYIDNSSHEDVCFTIKMDPTKLKRAEEEGLEKVFKLKS
TLTTTNMTLFDPNLKLQRYASELDILKDFCFHRLNAYTDRKNYLISKLEKEKRIISNKTK
FILAIINGELVVNKKKKKILVEELYRKGYDPYKDIHKVKKEEIFEQELLDAAENPEDNEE
IIAGVTVKDYNYLLNMPIFSLTLEKVEELLSQLKEKEQELEILKSITVETMWLKDIENVE
EAIEFQRNVELANREESNKFKVARRKIGAGFKKKKKKKKLTSDDESEGDTSDSSEFMINS
LNIKKNSKKTPNKKNNTSVRKKIRKIDSGISVDDNNTQTPILINSNEIDDSNLSYSKNGN
NAYNSDNTPLINKIINTSKHVVVNTPIVNHGSISSNHNGIDQTPAHGGINSININVSPNS
TVNINEFSGIKNKLLELEKKKKPRLTLAETIKMKNMEKGDNTAKETPRSRNTPKRKRSTL
LDTSKSKDDFDFGDEDSSKNDSSNASDSSYNI
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaataaaacaattgaagagcggtatcagaaaaagtctcaaattgagcacatt
ttgttgaggcctgatacctatataggtagtgttgaaatgcatactcaattattatggata
tggaataaagaaaaaaatcgaatggttcaaaaaaatataacttatgtaccagggttatat
aaaatatttgatgaaattatcgtcaatgctgctgatgtaaaagcgagggaaaaagaaaaa
agtgaaaatcctatgacttgtataaaaatagaaataaataaagagcaaaaaagaataagc
gtatataatgatggagaaggtataccagtagatatacataaagaaatgaatatatatgta
ccacatatgatatttggtgaattattaacatcagataattatgatgatgctgaagataga
ataacggggggtcgaaacggtttcggagctaagctaacaaatatttttagtaaagaattt
actgttcaatgtggagatagttcaagaaaaagagaatttaaaatgacatggtctcaaaat
atgtcaaagttttctgaaccacatataaaaaattataatggaaaagattatgtaaaagta
acatttaaaccagatttagataaatttggtatggccgagcttgatgatgatatagaatgc
ttattacataaaagagtatatgatttagcaggtacatgtaatgttcgtgtatatttaaat
ggcacaagattacctgttaaagattttaaaagctatgttgatttatatttaagagataat
agccatcctaataccaatcccagtgtttctaaaaatgcattaaatggtaatacagatgca
agtgttaataaaactattgataatctagatgttagtattttccatgacaatggaggaggt
gcaggtgatattactccatctaaaacaactgaagaaaatggaaattcgaattttaacaat
aataaatatgaagaagaaatagtaaaaattcatgaaaaacaacatagatgggaaatagtt
atttctaaaacagatggatcacaatttcaacaagtttcttttgttaatagtatttgtact
actaaaggtggtacacatgtaagttatattgttgatcaattattaaattctcttagcaaa
aaggctaatgcaaaaaataaaggaggtatggaaataaaatctggtcatataagaaatcat
ttatgggtatttgttaattgcctaatagttaatccaacatttgattcacaaactaaagaa
accttaactactaaacaatccaaatttggaagtaaatgtattttaacagataaaacaata
aacaatgttttaaaaagttctatactcagtaatatattattatgggcacaagccaaagct
caagttgaacttcgaaaaaaaatgaaagcaggttcttcaaaagcccgagaaagaattatt
ggaataccgaaattagaagatgctaatgatgcgggaagtaaatatagtcaagaatgtaca
ttaattttaacggaaggggatagtgctaaaacatcttgtttagctggattatcaattgta
ggcagagatagatatggtgtatttccattaaagggtaaacttcttaatgtacgagatgca
tcttttaaacaattaatggataataaagaaattcaaaatatatttaaaattatgggatta
gatattactgataaaaataaacaagatattaaaggacttagatatggttctttaatgatt
atgacggatcaggattatgatggatctcacatcaagggtttattaattaatatgattcat
aaattttggcccagtcttttaaaacataaaggctttctttgcgaatttgttactcctata
gttaaggttcaaaaagggaatcaggagttatctttttttacaattgccgaatatgaacaa
tggaaagaaaatacaaatttagtaggatggaaaataaaatactacaaaggtttgggtact
tcaactgataaagaatttaaacaatatttttctgatattcaaagtcataaaattgttttt
ttatggacaggagatagagatggtgattcaatagatatggcttttagtaaaaaaagaatt
gaagatcgaaaattatggctacaaaattttatacttggttcatatgttgatcataaagaa
aaggatttatcatattatgattttgtaaataaagaattaatttattattctagatatgac
acagaaagaagtataccgaatattatggatggatggaaacccggacaaagaaaagtttta
tatggttgctttaaaagaaatttaagaaatgaatgtaaagttgctcaacttgtaggttat
attgcagaacatagtgcatatcatcatggagagtcatcattacaacaaactattataaat
atggctcaaacatttgttggttcaaataacataaattttttagaaccatgcggacaattt
ggtagtagaaaagaaggtggtaaagatgcatctgcagctagatatatatttacaaaactt
gcatcatccactagaagtatatttaatgaatatgatgatccgattttaaaatatttaaat
gaagagggacaaaaaatagaaccacaatattatataccagttattcctacgattctagta
aatggctgtgaaggaataggaactggatattcatcatttattccaaattataattataaa
gatataattaataatattaaaaaatatatagataaagaaccattagtaccgatggtacca
tggtataaagattttaaaggaagaattgaacccaatggtaaatcaggatatgaaacaata
ggtattattaacaaaatagatgatgaaacattagaaattacagaattaccaataaaacga
tggacacaagattataaagaattcttagaagagttattaacagatgaaaaaaatcaatta
atcatagattacatagataatagttcgcatgaagatgtttgttttactattaaaatggat
ccaacaaaattaaaaagagcagaagaagaaggattagaaaaagtttttaaattaaaaagc
actttaacaactacaaatatgacattgtttgatccaaatttaaaattacaaagatatgca
tctgaattagatattttaaaagatttttgttttcatagattaaatgcatacactgataga
aaaaattatttaataagcaaattggaaaaagaaaaaagaattatttcaaataaaaccaaa
tttatattagctataattaatggagaattagttgttaataaaaaaaaaaaaaaaatactt
gttgaagaattatatagaaaaggatatgatccatataaggatattcataaagttaagaaa
gaagaaatctttgaacaagaattattagatgcagctgaaaatcctgaagataatgaagaa
ataattgctggtgtaactgtaaaagattataattatttactaaatatgcctatttttagt
ttaactctagaaaaagtagaagagttactatcccaattaaaagaaaaagaacaagaactt
gaaattttaaaaagtattactgttgaaacaatgtggttaaaagatattgaaaacgttgaa
gaagccatagaatttcaaagaaatgttgaattagctaatagagaagaaagtaacaaattt
aaagttgcaaggagaaaaataggagctggatttaaaaaaaagaaaaagaaaaaaaaacta
acatctgatgatgaatctgaaggtgatacatctgatagtagtgaatttatgattaattcg
ttaaatattaaaaaaaatagtaaaaaaacaccaaataaaaaaaataatactagtgttcga
aaaaaaattagaaaaattgattctggcattagtgttgatgataataatacgcaaactcct
atattaattaattctaatgagatagatgatagcaatctatcttattcaaaaaatggaaat
aatgcatacaattctgataatacacctttaattaataaaatcataaatacatcaaagcat
gtcgttgttaatactccaatagttaatcacggtagcattagtagtaatcataatggaatt
gatcaaacgccagctcatggtggaattaattccattaatattaatgtatctcctaacagt
accgttaatataaatgagttttcaggcatcaaaaataagctattagagcttgagaaaaaa
aaaaaacctagattgacattagcagaaacaattaaaatgaaaaatatggagaagggagat
aatactgctaaggaaactcctcgaagcagaaacacccccaaaaggaaaaggagtacacta
ttagatacctcgaaatcaaaggacgatttcgattttggagatgaggattctagtaaaaat
gattcatcaaatgctagtgacagttcctataacatttaa
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integrated database retrieval system