Plasmodium berghei: PBANKA_1011600
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Entry
PBANKA_1011600 CDS
T01111
Name
(RefSeq) chromatin assembly factor 1 P55 subunit, putative
KO
K10752
histone-binding protein RBBP4
Organism
pbe
Plasmodium berghei
Pathway
pbe03082
ATP-dependent chromatin remodeling
pbe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PBANKA_1011600
03083 Polycomb repressive complex
PBANKA_1011600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_1011600
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PBANKA_1011600
Histone modification proteins
HAT complexes
HATB complex
PBANKA_1011600
HDAC complexes
Sin3A-HDAC complex
PBANKA_1011600
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PBANKA_1011600
PRC2.2
PBANKA_1011600
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PBANKA_1011600
Heterochromatin formation proteins
Other heterochromatin formation proteins
PBANKA_1011600
Chromatin remodeling factors
NuRD complex
PBANKA_1011600
NuRF complex
PBANKA_1011600
NuRF complex (fruit fly)
PBANKA_1011600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
WD40
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
MIOS_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
55150036
NCBI-ProteinID:
XP_034421915
UniProt:
A0A509AMR1
LinkDB
All DBs
Position
10:complement(545257..547014)
Genome browser
AA seq
454 aa
AA seq
DB search
MKKQGNNLNNFNDINNKNDESQSNYINANVENSKYWQYNTILLYNVIMIYRCEWPSLFVE
WMPNVYKLNQDYYSQDLILGTYSTEKNNYILVLEVSLPSEELSQSNFYYDKICDFRHNSF
NDTNNKFKIKKKIYHECEINKISCNPEKTDVIACFSSNGNIHILNLNDYEYDETELKNNN
ACNFDYTLKAHSGEGWGLKWDKETKLISSCADDSYLCIWDINSSTISNDNISVKLDTITN
SSLVNVNNNSSKGIIYPVIKFFNNNIPLEDCCWRDQNILTVSDDGQLHIYDIRSKNAVNS
INVTNHTLNAVDVNPHNTNIFATGGTNKEIDLWDIRYTNKSLHRIISQKENIIKLQWDKH
QPGILSSSSSDKYIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNVLDFSLNSSYSM
MISSISEDNSLHIWQPSRQAYEDESDSHEDTEVE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacagggtaataacctgaacaactttaatgatataaataataaaaatgacgaa
tcacaatccaattacataaatgccaatgtagaaaattcaaaatattggcaatataacaca
atcttactttataatgtaattatgatatatcgctgtgaatggccatccctctttgttgaa
tggatgccaaacgtttacaaactaaaccaggattattattctcaagatttaatactagga
acgtatagcactgagaaaaataactacatcctcgttttagaagtgagtttaccaagcgaa
gagctatctcaatcaaatttttattacgataaaatttgtgattttagacataactcattt
aatgatacaaataataaatttaaaataaaaaaaaaaatatatcatgaatgtgaaataaat
aaaataagttgtaatccagaaaaaacagatgttatagcatgtttttcatccaatggaaat
atacacattttaaatttaaatgattatgaatatgatgaaactgaattaaagaataataat
gcatgtaattttgattatactttaaaagctcattcaggtgaaggatggggattaaaatgg
gataaagaaacaaaattaatatcatcgtgtgcagatgattcttatttatgtatatgggat
ataaattccagtactatatccaatgataacattagtgtaaaacttgatacaattacaaac
tcatcgctagttaatgttaataataattcttctaaaggaattatatatcctgttatcaaa
ttttttaataataatattccattagaagattgttgttggcgcgatcagaatatattaaca
gtatcagatgatggccaattacatatatatgacattcgtagtaaaaatgcagtaaactca
ataaatgtcacaaatcatacattaaatgcagttgatgttaatccacataatacgaatata
tttgcaacaggtggaacaaataaagaaattgatttatgggatatccgttatactaataaa
tcattacatcgaattatttctcaaaaagaaaatataataaaattacaatgggataaacat
cagccaggaatattatcatcatcatctagcgataaatatatttatttttttgatacaaat
aaaatcggaatagaacaaacttatgaggattctcaagatggcccacctgagcttatattt
attcatggtggacattcctcgaatgtgttagatttttctctcaattcatcttattcaatg
atgatttcttcaatcagcgaagataattctcttcacatttggcaaccatcacgacaagcc
tatgaggatgagtcagatagtcatgaggatacagaagttgaatag
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