Plasmodium berghei: PBANKA_1104000
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Entry
PBANKA_1104000 CDS
T01111
Name
(RefSeq) ATP-dependent helicase, putative
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbe03009
]
PBANKA_1104000
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_1104000
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PBANKA_1104000
Ribosome biogenesis [BR:
pbe03009
]
Eukaryotic type
Pre-60S particles
Helicases
PBANKA_1104000
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
PBANKA_1104000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ResIII
CMS1
Glce_b_sandwich
DbpA
Cas3-like_C_2
DUF2095
Motif
Other DBs
NCBI-GeneID:
55150402
NCBI-ProteinID:
XP_034422249
UniProt:
A0A509ALM4
LinkDB
All DBs
Position
11:<165137..>167260
Genome browser
AA seq
707 aa
AA seq
DB search
MKSLFCSVINNNGRKLKIHIAICLFLLYLINIPFCKTKKRKHFNSIDRNLFVDVKKGYNY
YFDNKKNNYFSKKCKNYHKIKEVKNVNIQCKEVDEENKLQGEEKENKELFSSIPQINQKI
VDFLETKGIKYMTKIQSKSFMPIYEGNDIIGRSETGSGKTLAFALPLVEKLYKNMESKKK
IIKNKSNEINSIQHLSEGHKNENTDSMDKYPYILVLEPTRELSKQVETTFKEISQFYNFN
IMSIYGGESYTYQENKLRKGIQILTGTPGRIIDHIEKKNLSLKNIKYVVLDEADEMLNLG
FTHDIERILSYINIKDAQVLLYSATTPSWIKDISSKYLKNPIYIDVINTINKTSKTIQHI
AIKTPYDIKEKAMLLEDIILVKSNGGQVIIFTRTKLEADILCSEGSFNYLTFSVLHGNIA
QSTREHTMQRFRSGMFQVLIATDIAARGLDISNVDLVIQCYPPTYPAIYIHRSGRTGRAN
KKGMSIVLFSNEDKNDVIKIEKNCGIKFTTESLPNNEQVFHSVSKITLKKIENVNTEVLP
FFHKSANELIEKSNLLNINQIDLISRCLAIISKKEYIKKRSLISGLSDTITLTFLNKKRK
WKNIYDAIYWINKISNELNINVFNKILQIKINNKDQEFSYFDLNQKLAESLVQNFNNMAK
IENKQTFDLSIAQTIPPQSELSSDSYRTNTYSQKKRNYSYKKRPSYY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattattttgtagtgtaataaataataatggtagaaaattaaaaatacatatt
gccatttgtttgtttctgctgtacctaataaacataccattttgcaagacaaagaaaagg
aaacattttaattcaatcgatagaaatttgtttgtagatgtaaaaaagggatataactat
tattttgataataaaaaaaataattatttttcaaaaaaatgcaaaaattatcacaaaata
aaagaagttaaaaatgtcaatatacaatgtaaagaggtggatgaagaaaataaattgcaa
ggtgaggaaaaagaaaataaagaattgttttctagcatacctcaaattaaccaaaaaatt
gtcgactttttagaaacaaaaggaataaaatatatgacaaaaatacaatcaaaaagcttt
atgccaatatatgaaggtaatgatataataggaagatcagaaacgggttctggaaaaact
ttagcatttgctctcccattagttgaaaaattatataaaaatatggaatccaaaaaaaaa
ataataaaaaataaatcaaacgaaataaattctatacagcatttatctgaaggacataaa
aatgaaaatacagatagcatggataaatatccatacattttggttttagaacccactcga
gaattatcaaaacaagtagaaactacatttaaggaaattagtcaattctacaattttaat
attatgtctatatatggaggggagagctatacatatcaagaaaataaattgcgaaaagga
atccaaatattaacaggcacacctggacgtataattgatcatatagaaaaaaaaaatttg
tcattaaaaaatataaaatatgttgtattagatgaagcagatgaaatgctaaatttaggt
tttacacatgatattgaaagaatattaagttatataaatatcaaagatgcacaagtactt
ttatattctgctactactccatcatggattaaagatattagttctaaatatttaaagaac
ccgatatatatagatgtaataaatactattaataaaacatctaaaactatacaacatata
gcaataaaaacaccttatgatataaaagaaaaagcaatgcttttagaagatattatttta
gtaaaatcaaatggagggcaagttattatttttactcgaacaaaattagaagctgatatt
ttatgctcagaaggatcatttaattatttaaccttttcagttttacatggtaatatagca
caatcgactagagagcatacaatgcaaagatttagaagtggaatgtttcaggtattaatt
gcaacagatattgcagccagagggttagatatatcgaatgtagatttagttatacaatgt
tatccaccaacatacccagctatttatatacatagatcgggaagaactggaagggctaat
aaaaaaggaatgtctattgttttattttcaaatgaagataaaaatgatgtaataaaaata
gaaaaaaattgtggtattaagtttactacagaatcattaccaaataatgaacaagttttt
cattctgtttctaaaataactttaaaaaaaattgaaaatgtaaacactgaagttttacca
ttctttcataaaagcgcaaatgaattaattgaaaaatccaatttgttaaatattaatcaa
atagatttaatatcaagatgtctagctattatttcaaaaaaagaatatataaaaaaaaga
tcattaattagcggattatcggatactattactttaacatttttaaataaaaaaagaaaa
tggaaaaatatatatgatgctatttattggattaataaaatatctaatgagttaaatatt
aatgtatttaataaaattttacaaattaaaataaataataaagatcaagaattttcttat
tttgatcttaatcaaaaactagctgaaagcttagttcaaaattttaataatatggcaaaa
atagaaaataaacaaacatttgatttatctattgctcaaactattcctcctcaatctgaa
ttatcttcagattcgtatcgaactaatacttattcacaaaaaaaaagaaattattcatac
aaaaaacgtccatcttactactaa
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