Plasmodium berghei: PBANKA_1105800
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Entry
PBANKA_1105800 CDS
T01111
Name
(RefSeq) TATA-box binding protein, putative
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pbe
Plasmodium berghei
Pathway
pbe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PBANKA_1105800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbe03000
]
PBANKA_1105800
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_1105800
Transcription factors [BR:
pbe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PBANKA_1105800
Transcription machinery [BR:
pbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PBANKA_1105800
RNA polymerase III system
TFIIIB
PBANKA_1105800
RNA polymerase I system
SL1/TIF-1B
PBANKA_1105800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
55150420
NCBI-ProteinID:
XP_034422267
UniProt:
A0A509ARY3
LinkDB
All DBs
Position
11:234326..235183
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AA seq
285 aa
AA seq
DB search
MDENDGLNDPDFFLREENHLKDDNYDYNKKKVSMLLNKNNTLEKYNDETNNNCERDVEKY
SDKNNQIEDNVINESNLEIIEDIQNYENDDNKFSNIKNKLIHKDIPLKIHNIISSANLDA
EINLRLVAVSIKSAEYNPSKINTLIIRINNPKCTALIFKSGRIMLTGTKSKTDSIKGCKK
IGKIIKIVTNQNIRLKNFKIENIIASANCNIPVRLEMLAHDHKEYCNYEPELFAGLVYRY
KPASNLKSVILIFVSGKIIITGCKSLQKLNTVFQDIYNVLVQYKS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacgatggtctaaatgatcccgatttcttcttaagagaagaaaatcattta
aaagatgataattatgattataataaaaaaaaagttagtatgcttttaaacaaaaataat
acattggagaaatataacgatgaaacgaataataattgtgaaagggatgtagaaaaatat
tctgataaaaataaccaaatagaagacaatgtgattaatgaaagcaatttagaaataata
gaggatattcaaaattatgaaaatgatgataacaaattttctaatataaaaaataaatta
attcataaagatataccacttaaaatacataatataatatcatcagcaaatttggatgca
gaaataaatctacgacttgtagcagtttcaattaaaagcgcagaatacaaccctagtaaa
attaacacgcttataattcgaataaataatcctaaatgcacagcattgatttttaaaagt
gggagaataatgcttactggcacaaaaagtaaaacagattctataaagggatgtaaaaaa
attggtaaaatcattaagatagttactaatcaaaatatcagattaaaaaattttaaaatt
gaaaatataattgctagtgcaaattgtaatataccagttagattagagatgcttgctcat
gatcataaagaatattgcaattatgaacccgagttatttgcgggtttagtttatagatac
aaaccagcatcaaatttaaaatcagttattttgatttttgtttctggaaaaattattatc
actggttgtaagtctttacaaaaacttaacactgtttttcaagatatttacaatgtccta
gtacaatataaaagttga
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