Plasmodium berghei: PBANKA_1111900
Help
Entry
PBANKA_1111900 CDS
T01111
Name
(RefSeq) CDK-activating kinase assembly factor MAT1, putative
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pbe
Plasmodium berghei
Pathway
pbe03022
Basal transcription factors
pbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PBANKA_1111900
09124 Replication and repair
03420 Nucleotide excision repair
PBANKA_1111900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_1111900
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1111900
Transcription machinery [BR:
pbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PBANKA_1111900
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PBANKA_1111900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4
zf-UDP
zf-RING_2
zf-RING_5
zf-RING_4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_5
Fer2_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
55150481
NCBI-ProteinID:
XP_034422326
UniProt:
A0A509ALU4
LinkDB
All DBs
Position
11:complement(478326..479108)
Genome browser
AA seq
260 aa
AA seq
DB search
MDEYKCSLCLDDIYINTEKKLFLFDICKHKICGECLENHLNKHNKQHCPRCKIAITKKNV
VPFDIEEKIYSNQKNIRSKLTEIFNKKRHNFQNTPLYNNYLEKIEDIIFMLTNECDEKKR
KIIEAYIKKYEKENIKLIEENNSLIYENEKKKIHEIVKEEGNLYEIIKQRPIVNKLNNEA
YVHSLVKENPKLFNEIKVTNISESQPQPLNPAIRNDTDIPIRKFVSEEEIKKSDYSGGYD
ISIVFKRCDQEFNSTIYLNI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtataaatgttccttatgtttggatgacatatatataaatactgaaaagaaa
ctattcttatttgatatatgtaaacataaaatatgtggggaatgtttagaaaaccatttg
aataaacacaataagcagcattgcccacgttgtaaaatagctataacaaaaaaaaatgta
gttccatttgatatagaagaaaaaatatattccaatcagaaaaatataagaagtaaatta
actgaaatatttaataaaaaaagacataattttcaaaatacacccttatataataattat
ttagaaaaaattgaagatataatttttatgctaacaaatgaatgtgatgaaaaaaaacgt
aaaattatcgaagcatatattaaaaaatatgaaaaagaaaatataaaattaatagaagaa
aataattctcttatatatgaaaatgaaaaaaaaaaaattcatgaaattgttaaggaagaa
gggaacctatatgagataattaaacaaagacctattgtaaataaattaaataacgaagca
tatgtccattcactagttaaagaaaaccccaaattatttaatgagattaaagtaactaat
atttctgaatcacaaccacagccattaaaccctgccatcagaaatgatacggatatacct
atacgtaaatttgtttcagaagaggaaattaaaaaatctgactattcaggaggatatgat
atttctattgtttttaagagatgtgatcaggaatttaattctactatatatctcaatata
tag
DBGET
integrated database retrieval system
