Plasmodium berghei: PBANKA_1130100
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Entry
PBANKA_1130100 CDS
T01111
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pbe
Plasmodium berghei
Pathway
pbe03022
Basal transcription factors
pbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PBANKA_1130100
09124 Replication and repair
03420 Nucleotide excision repair
PBANKA_1130100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_1130100
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1130100
Transcription machinery [BR:
pbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PBANKA_1130100
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PBANKA_1130100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
55150667
NCBI-ProteinID:
XP_034422508
UniProt:
A0A509AL40
LinkDB
All DBs
Position
11:1144341..1145324
Genome browser
AA seq
327 aa
AA seq
DB search
MHKNEEVDGTNGESVKDKKLAMSHLILVIDVNFLIWSQGLKIKFDKNNIKTVKLSQFLKS
VFQFARFYCFMSSSERICIIATCSGNSKIIYENYISYTKNNLTENDYCTNAYEKLINFIK
DNNNNSKTYEMVESTLSSALAIALCYNNRICNLYENINSRIFLLDISKSHFYTNQYTQLM
NIAYNAKRNNIIIDVFSLNHKTQILEQICNITNGLYIDNSIFLSINCADNVEDILTQTIM
FWFLPSTHSRKYFSNTYLNEDTNIAVCTCHNKQIDIAYICSCCLAIYCSEKDAQTNKERI
SCSVCKTRFTKSLLRNKTVSDLNFTTI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagaatgaagaagttgatgggacaaatggggaaagcgtgaaggataaaaaactg
gctatgagccacttaattttagtaattgatgtaaattttttaatatggagccaaggatta
aaaataaaatttgataagaataatataaaaaccgtaaaattgtctcaatttttaaaatcc
gtttttcaatttgcacgattttattgttttatgagcagttcagaaagaatatgtataata
gctacctgttcaggtaattccaaaataatatatgaaaattatatatcttatacaaaaaat
aatttaacagaaaatgattattgcactaatgcatatgaaaagttaataaattttatcaag
gataataataataatagcaagacctatgaaatggtcgaaagtacattatcatcagcttta
gcaattgctttgtgctataataatagaatatgtaatttatatgaaaatattaattctaga
atatttctacttgatatatcaaaaagccatttttatacaaatcagtatacacagctaatg
aatatagcatataatgctaagcgaaataacataataattgatgtattttctcttaatcat
aaaactcaaatattagaacaaatttgtaatatcactaatggattgtatatagataatagt
atttttttaagtatcaattgtgccgataatgttgaagatatactaactcaaactataatg
ttctggtttttaccttcgactcattccagaaaatatttttcaaatacatatttaaatgag
gatactaatatagctgtgtgtacatgccataataaacaaattgatatagcttatatatgt
tcatgttgtttggctatttattgctctgaaaaggacgctcaaacaaacaaggaaagaatt
tcatgttctgtatgtaaaacacgatttaccaagtctctcttgcgaaataaaacagtatcc
gatttgaatttcacgactatttag
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