Plasmodium berghei: PBANKA_1226800
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Entry
PBANKA_1226800 CDS
T01111
Name
(RefSeq) DNA repair and recombination protein RAD54, putative
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pbe
Plasmodium berghei
Pathway
pbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBANKA_1226800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1226800
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PBANKA_1226800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
55151120
NCBI-ProteinID:
XP_034422946
UniProt:
A0A509ANP1
LinkDB
All DBs
Position
12:complement(1027444..1030590)
Genome browser
AA seq
1048 aa
AA seq
DB search
MRKYGGNTKRNRDDDADESNNTDRKCITLVRATLLPILSIGKNEKTTLFTPFRNPLPGFV
SDKSLYLRKTLGVKVRKTGWINLMKNSIPRRSDETGDENDKVEDIIRKFDPLVLYEDENS
KIEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLL
KQGYNKKAAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDSVKEKIVSKLEGFKYD
LKSTILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLLLSG
TPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLAELS
TITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEGLYVLFLKDKKLLKSDNSNNKVNV
LINIKKLEKICNHPLLLNANDIKDIGHIPVVKLIEDVIAENVKGRGNKISNKNSVNLSTN
NSMENISDTLNNNNNNNNGSKDGEYLRERRKAVELDYDKSVKKLIEECKRDVYRCYYNLS
SKFQLLHFLLKTIKHETNDKVVIVSNYTQTLDYMEILCKENHYKFVRLDGGISIKKRHKV
ISDFTNTDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKKIC
YIYRLFCTGTIDEKVYQRQISKDGLSSMIVTNTNLSKDQLSDENVKKLFNYKNNTICETH
DNIECNRCNFKDNTEVYSEQLEDFEEEDVNTWAHHLNIDTVPDAVLIKAVKEATECKINH
MNTLPILKKLKHEFVTFSMSCKIEFRDDLIKQKANKNNISYQPIAMSEKKEPTKSKRTKQ
KEPSEYSDSTNDEEEDEEEDEDEDEDEDEDEDEEEEEEEDEEEEEDEEEDEEDQKREMKK
KECKKKLREIMEYQKEKELIKKQSNSNEIEKREEEEQEQEQEQEEGEEQISKDNSFSHKI
ENPKNEKKKQGNINNVLELNNHEKSTKLKINEKNGCDDLNSVRVTRNMTQKNLMELLSQD
DESKPEILISQDEDMSVENISTDSSCFI
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtacggaggtaacacaaaacgaaacagagatgatgatgcagatgaaagcaac
aacacggatagaaaatgtattacattggttagagcaacattgttgccaattttgagtata
gggaaaaatgagaaaacaacattgtttacaccatttcgaaatccattgccaggattcgta
agtgataaaagtttatatttaagaaaaacgttaggtgttaaagtaaggaaaacgggatgg
ataaacttgatgaaaaattcaatccctagaagatcagacgaaacaggtgatgaaaatgat
aaagttgaagatataataagaaagtttgatcctttagttttgtatgaagatgaaaatagt
aaaatagaagttgatccaatattagcacaatatttaagagaacatcaaagagaaggtgta
caatttgtttttgaatgtttaatgaatttaaaagatgaaaaaataagtggatgtatatta
gctgatgatatgggactaggaaaaacactacaaagtataagtgtattatatacattatta
aaacaggggtataataaaaaggcagcagttagaaggtgtctaattttatgtcctgctagt
ttaataaataattggaatgatgaaattaataaatggttaccaaacagatgtactgtaact
tgtgttaacgatagtgtaaaggaaaagattgtaagtaaattagaaggatttaaatatgat
ttaaaatcaacaattttgatatgttcctatgaatgttttcgtattaataatgattcaatt
gataagtccgctatagatatgataatatgtgatgaagcacatcgattaaaaaatgataaa
accaagacatatacaagtatatataaattatcagcaaaaaaaagattattattatcaggt
acaccaatacaaaacgatttaggagaattttttgcactgatttctttgtgtaatcctgat
ttatttgatgatactaattcatttcgaaaaaaatttgcgaacccaatattaataggccga
gataaagatgcaacagaaaaggagcaacaaattgcatctgagcgtttagcagagttatca
actattactaacaaatttattttaagaagaactaataacttattatctaaagttttacca
gtaaaatatttgataaatatttttataaaactaaaccctatccaagaaggtttatatgta
ttatttttaaaggataagaaattattaaaatctgataattcaaacaacaaagttaatgta
ttaattaatataaaaaaattagaaaaaatatgtaaccatcctttattactcaatgcaaat
gatataaaggacattggccatattccagttgtaaaactgattgaagatgtgatagcagaa
aatgtaaaaggtcgaggaaataaaataagtaataaaaatagtgttaatttgtctactaat
aatagtatggaaaatatcagtgatactcttaacaataataataataataataatggttct
aaagatggagaatatttgagagaaagaagaaaagcagttgaattagattatgataaatct
gtaaaaaaattaatagaagaatgtaaacgagatgtatatagatgttattataacctatca
tctaaatttcagttattacattttttgcttaaaacaattaaacacgaaactaatgacaaa
gtagttatagtaagtaattacacacaaacattagattatatggaaatattatgtaaagaa
aaccattataaatttgttagattagatggtggtataagcataaaaaagcgacataaagtc
attagtgatttcactaatacagatgatatatttatctttttattatcttcaaaatcggga
ggatgtggtattaatttaataagttcaaatagacttattttattagatcctgattggaat
ccagcaaatgataaacaagcattagcaagggtttggcgtgaaggtcagaaaaaaatttgt
tatatttatcgattattttgtacaggtactattgatgaaaaagtatatcaaagacaaata
agcaaagatggcttatcttcaatgattgtgacaaatacaaatttatctaaggatcaatta
tcagatgaaaatgttaaaaaattatttaattataaaaataatacgatatgtgaaactcat
gataatattgaatgtaatagatgtaactttaaagataatacagaagtatattctgaacag
ttagaagattttgaagaagaagatgttaatacttgggctcatcatctaaatatcgacact
gtaccagatgctgttttaattaaagcagttaaagaagcaacggaatgcaaaataaaccat
atgaacacattgccaatacttaaaaaattaaagcatgaatttgttactttttctatgagt
tgtaaaatagaatttagagatgatcttatcaaacaaaaggcaaacaaaaataatatttca
tatcagcctattgctatgtcggaaaaaaaagaacctactaagtcaaagcgaaccaaacaa
aaagaacccagtgaatatagtgatagcacaaatgatgaagaagaagatgaagaagaagat
gaagatgaagatgaagatgaagatgaagatgaagatgaagaagaagaagaagaagaagat
gaagaagaagaagaagatgaagaagaagatgaagaagaccaaaagagagaaatgaaaaaa
aaagaatgcaaaaaaaaacttcgagaaataatggaatatcaaaaagaaaaagaattaatt
aagaaacagagcaattcgaatgaaattgaaaaacgagaagaagaagaacaagaacaagaa
caagaacaagaagaaggggaagaacagataagtaaagataattcattttctcataaaatt
gaaaatcccaaaaatgaaaaaaaaaaacaaggcaatattaataatgtattggaattaaat
aatcatgaaaaatcaacaaaattaaaaattaatgaaaaaaatggatgtgatgatttaaat
tcagtacgagttacaagaaatatgacacaaaaaaatcttatggaacttttatcacaagat
gatgaatcgaaacctgagattctcatatcacaagatgaagatatgtcagttgaaaatata
agtacagatagttcctgttttatatga
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