Plasmodium berghei: PBANKA_1232100
Help
Entry
PBANKA_1232100 CDS
T01111
Name
(RefSeq) serine/arginine-rich splicing factor 1, putative
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1232100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1232100
Spliceosome [BR:
pbe03041
]
Common components
Common spliceosomal components
SR proteins
PBANKA_1232100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
55151172
NCBI-ProteinID:
XP_034422998
UniProt:
A0A509AMJ5
LinkDB
All DBs
Position
12:complement(1242125..1243265)
Genome browser
AA seq
315 aa
AA seq
DB search
MVIRDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAA
DAIKEKDGCDFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSKSRRGRYVVEVSGLPLSG
SWQDLKDHLREAGECGHADVFKNGTGEVSFFHKEDMLEAIEKFNGSTFRSHEGEKAKITI
RQKKTSWRRDDGYGRYNDRNRSYSSRSYSRSDKRSYSRSRSYSSRSYSRSRSRSRSRSRS
RSRSRSRSRTSSSRSRSMDRRRDAYEKKRSYSRSSSYQDRRRNNRSISKSGSRSISRSGS
RSASRSSSWSNKRRH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggttatacgtgatagcgtttcaagaatatacgttggtaatttaccatcacatgttaca
tctagagatgtagaaaatgaatttagaaaatttggtacaatattaaaatgtgatgttaaa
aaaacagtatcaggtgctgcatttgcatttatagaattcgaagatgcacgagatgcagca
gatgcaattaaagaaaaagatggatgtgattttggtggaaataaattacgagttgaagtc
ccatttaatgctagagacaatggaaaatataactcaagaggtagaggaatgatgggaaga
ggctcaaaatcaagaagaggccgatatgttgtggaggtttctggattacccctttcaggt
agttggcaagatttaaaagatcatcttagagaagcaggggaatgtggccatgcagatgtt
tttaaaaatggtacaggtgaagtttccttttttcataaagaagatatgcttgaagctatt
gaaaaatttaacggatcaacatttagatcacatgaaggagaaaaagcaaaaataacaata
cgccaaaaaaaaacatcatggcgacgagatgatggatatggtagatataatgatagaaat
agaagctattcaagccgaagttattcaagaagtgataagagatcctattcaagaagcaga
agctacagtagcaggagctatagtagaagcagaagtagaagtagaagcagaagccgaagc
agaagtcgtagccgaagtagaagcagaacatctagtagtagaagtagaagtatggataga
agaagagatgcatatgaaaaaaaaagaagctactctagaagctcgtcttatcaagataga
aggagaaataatagatccatatcaaaatcgggatctagatctatttccagatcgggttcg
cgatctgcttcaagatcttcatcatggtctaataaaagaagacattag
DBGET
integrated database retrieval system
