Plasmodium berghei: PBANKA_1305300
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Entry
PBANKA_1305300 CDS
T01111
Name
(RefSeq) FACT complex subunit SSRP1, putative
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbe03000
]
PBANKA_1305300
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_1305300
Transcription factors [BR:
pbe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
PBANKA_1305300
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
PBANKA_1305300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
PH_SPT16
Motif
Other DBs
NCBI-GeneID:
55151394
NCBI-ProteinID:
XP_034423206
UniProt:
A0A509APF9
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All DBs
Position
13:<277081..>278562
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AA seq
493 aa
AA seq
DB search
MPADNTGSTSSNSPVISIGNIRGLGGCDYGPFRMSNEFLGWKNKKTNSVYQYKCNDISEG
EWIKLSYNNNRLHLKFNESKDNLIVFFDGFPDRNLSEITQHFQKYFNIKLGTRKLATKGW
NWGEFKLENSNLIFDIDKKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSE
IRFYYPHENDENQNFQDLKNNLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTF
KLHGKSYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDM
DLDINASEEDIQNYKLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYR
AASGQLYPLNKYFLFVVKPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGISYEYT
NIDKSEYAPLLEFLKSKNLNIQDDANVSEKKTDFDDDDDDLSESDEEDYVAEEEDEDDDN
DDDDEYDDEDDDK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgataatactggaagcacgtcaagcaatagtccggtaatttcgataggtaac
atccgaggtttgggaggatgtgactatgggccatttagaatgtctaacgagtttttagga
tggaaaaataaaaaaacaaatagcgtatatcaatacaaatgcaatgatattagtgaaggc
gaatggataaaactaagttacaataataatagattacatttaaaatttaatgaatctaaa
gataatttgattgtattttttgatggttttcctgatcgaaatctttcagaaattacacaa
cattttcagaaatattttaatataaaactaggtaccagaaaactagctacaaagggatgg
aattggggagaattcaagttagaaaattcaaatttaatttttgatattgataaaaaatac
gcatttaatattaatacaaataatatcaaccaactaaatgtgcaaataaaaacagatata
gccatagaattaaaaaatgatgaaaataaacaaaatacaaatgaagatgtactttcagaa
attcgtttttattatcctcatgaaaatgatgaaaatcaaaatttccaagatttaaaaaat
aatctattagaaaaagttaatataggagattcaaagagtgaatgtattgcatcattatct
aatataccattattagtaccaagaggaagatatgaaattgaaatgtattcaaaaactttt
aaattacatggaaagtcttatgactttactgttcaatattcaaatattaataaaatgtta
ttagtacccaaaactaattcaaatcaatatattttaatatttagtttaaataataaaatc
aaacaaggtcaaactgaatatccttttattttaattcaattaagtaatgacgatgatatg
gacttagatattaatgcatcagaagaagacatacaaaattataaattagaaaaaacatta
acaggaaaagcttatgatgttgttacacgactatttacagctttagctaaaaaaaatgca
attattccaggagattatagaacagctaaaaatgagcatggcattacatgcagttataga
gcggctagtgggcagttatatcctttaaataaatatttcctttttgttgtcaaacctgtt
attttgatttcttttgatgatattgttactctaagctttcaaaggacaggaaatataaat
cagcatcgtttcttttctctaattattaaacataaaagaggaattagttatgaatataca
aatatcgataaaagcgaatatgcaccactactagaattcttaaaaagtaaaaatcttaat
atacaagatgatgcaaatgtctctgaaaaaaaaactgatttcgatgacgatgatgatgat
ctttctgaatccgatgaagaagattatgtagccgaagaagaagatgaagatgatgacaat
gacgatgatgatgaatatgatgacgaggatgacgacaaatga
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