Plasmodium berghei: PBANKA_1309700
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Entry
PBANKA_1309700 CDS
T01111
Name
(RefSeq) ATP-dependent RNA helicase DDX5, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1309700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1309700
03009 Ribosome biogenesis [BR:
pbe03009
]
PBANKA_1309700
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PBANKA_1309700
Spliceosome [BR:
pbe03041
]
Complex A
U1 snRNP components
U1 related factors
PBANKA_1309700
Complex B
PBANKA_1309700
Ribosome biogenesis [BR:
pbe03009
]
Eukaryotic type
Pre-60S particles
Helicases
PBANKA_1309700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Cas3-like_C_2
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
55151438
NCBI-ProteinID:
XP_034423250
UniProt:
A0A509APR4
LinkDB
All DBs
Position
13:452746..455713
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AA seq
522 aa
AA seq
DB search
MKGFNNFQNRSNNNYQSYGGGSHGNHQGYHSGRQNHGNNSGYNNNSNTLGKNLNPIDWTN
IKLVPFEKNFYKEHDDIRKLSSKEVKEIRDKHRITILGGDNIPNPVELINKVGFPDYVLK
SLRNNNIVSPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPSLKHGDG
PIVLVLAPTRELAEQIRQECIKFSVESKIRNTCAYGGVPKGGQIYALRQGVHILIACPGR
LIDLLEQNATNLRRVTYLVLDEADKMLDMGFEMQIRKIVEQIRPDRQTLMWSATWPKEVQ
SLARDLCKDQPIHVNVGSLTLTACRRIKQEIYLIEEHEKLGNLKSLLQRIFKENDRIIVF
VETKRSADFITKALRLEGMPALCIHGDKKQDERRWVLNDFKTGKSPILIATDVASRGLDI
KNVKFVINYDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLAKELVKILRESEQPI
PPQLEKISFSTGNSQRRNPYYSSGRSGYNSNNIPVRGGNKYY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttttaataattttcaaaatcgatcaaataataattatcagagctatggtgga
ggctcacatggaaatcatcaaggctatcattcaggaagacaaaatcatggaaataattcg
ggttataataataattcaaacacacttggaaaaaatttaaatccaattgattggactaat
attaaattagtaccatttgaaaaaaatttttataaagaacacgatgatattcgtaaattg
tcatcaaaagaggtaaaagaaatcagagataagcatagaattactatattaggtggcgat
aatataccaaatcctgttgaattaattaataaagttggttttcctgattatgtattaaaa
tctttaagaaataataatattgtttctcctacccctatacaaatacaaggttggcctata
gctttatcaggtaaagatatgattggtaaagctgaaacgggtagtggtaaaacgcttgct
tttattttacctgcattcgttcatatattagctcaaccaagtttaaaacatggggatgga
ccaattgttttagtattagcacctactagagaattagctgaacaaatcagacaagaatgt
attaaattttcagtagaatctaaaattagaaatacttgtgcatatggtggagtgccaaaa
ggtggacaaatttatgccttaagacaaggcgtacatatcttaattgcttgtccaggacgt
ttaattgatttattagaacaaaatgcaactaatttaagaagagttacatacttagtttta
gatgaagctgataaaatgttagatatgggttttgaaatgcaaattagaaaaattgttgaa
caaattaggccagatagacaaacattaatgtggtccgctacttggccaaaagaagtacaa
tcactagctagagatttgtgtaaagatcaaccaatacatgtaaatgttggttcgctaact
ttaacagcatgccgtagaattaaacaagaaatttatcttattgaggaacatgaaaaattg
ggaaatctaaaatcattactacaaagaatattcaaggaaaatgataggataattgttttt
gtggaaacaaaaagaagcgctgattttataacaaaggctttacgattagagggaatgcca
gcattatgtatacatggagataaaaaacaagatgaaagaagatgggttttaaatgatttt
aaaacaggaaaaagcccaattttaatagcaacagatgttgcatcaagaggtcttgatatt
aaaaatgtaaaatttgtaataaattatgattttcctaatcaaattgaagattatgttcac
agaattggtagaacaggaagagcaggcgcgcatggtgcctcttttacatttttaacatct
gataagtatagattagctaaagaattagttaaaatattaagagaatctgaacaacctata
ccaccacaattagaaaaaatatcattttcaacgggtaacagtcaaagaagaaacccttat
tatagttctggacgttcaggatacaattctaacaatattccagtaagaggcggaaataaa
tattactaa
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