Plasmodium berghei: PBANKA_1317800
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Entry
PBANKA_1317800 CDS
T01111
Name
(RefSeq) tRNA intron endonuclease, putative
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbe03016
]
PBANKA_1317800
Enzymes [BR:
pbe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PBANKA_1317800
Transfer RNA biogenesis [BR:
pbe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PBANKA_1317800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
55151519
NCBI-ProteinID:
XP_034423330
UniProt:
A0A509AQE2
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Position
13:<746547..>747102
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AA seq
108 aa
AA seq
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MTNRIAKREIVYSDLNNHFVVINDIKYGSDFVLYKESVSHEHAFALVFVKDESSILTDKE
KIIISRICESVKKRGIIAYVDDHTETVKYEELIRKKNNTKRITNIYAL
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgactaatagaattgcaaaaagagaaattgtatatagcgatttaaataaccattttgtt
gtaataaatgacataaaatatggatccgattttgtactatataaagagagtgtgagccac
gaacatgcctttgctctcgtttttgtaaaagacgaatcttcaattttaactgataaggaa
aaaattatcatttcgagaatatgtgaaagcgttaagaagaggggaataattgcatatgta
gatgatcacacagagacagttaaatatgaggaattaatcaggaaaaaaaataataccaaa
cgaataacgaatatatatgccttatag
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