Plasmodium berghei: PBANKA_1326800
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Entry
PBANKA_1326800 CDS
T01111
Name
(RefSeq) replication factor C subunit 3, putative
KO
K10756
replication factor C subunit 3/5
Organism
pbe
Plasmodium berghei
Pathway
pbe03030
DNA replication
pbe03410
Base excision repair
pbe03420
Nucleotide excision repair
pbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBANKA_1326800
03410 Base excision repair
PBANKA_1326800
03420 Nucleotide excision repair
PBANKA_1326800
03430 Mismatch repair
PBANKA_1326800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_1326800
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_1326800
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1326800
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PBANKA_1326800
DNA Replication Termination Factors
ELG1-RFC complex
PBANKA_1326800
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PBANKA_1326800
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PBANKA_1326800
Check point factors
HRAD17(Rad24)-RFC complex
PBANKA_1326800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
ResIII
AAA_16
AAA_14
RuvB_N
AAA_assoc_2
AAA_30
DUF815
AAA_19
DEAD
AAA_24
bpMoxR
AAA_3
AAA_7
ATPase_2
AAA_5
Viral_helicase1
NPHP3_N
TIP49
GPAT_N
nSTAND3
RCF1-5-like_lid
SLFN-g3_helicase
ABC_tran
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
55151609
NCBI-ProteinID:
XP_034423420
UniProt:
A0A509AQN9
LinkDB
All DBs
Position
13:1068387..1069865
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AA seq
344 aa
AA seq
DB search
MIDANPPKIDEQIPWVEKYRPSVLNDIISHEQVISTIRKFVEKGELPHLLLHGPPGTGKT
STILAVCKELYGESRSSFVLELNASDDRGITVVREQIKTFAESKNHYNICERTSLKLIIL
DEADHMTFPAQNAMRRIMENYAKNVRFCLICNYVNKITPAIQSRCTSFRFSPLKEEYMLN
KALDIAKSENVNLTKNGVESLIRVGRGDMRRILNCLQVVSLSHKNMVIDENVILSTLDIP
LPTEIKFILEHLTKSTIKESYEIITKLQEDKGYSIKDIMICLYETVLTYDYPDSAICLLL
KNFGEIEERCASGTTEQITLSSLISAFIEFRNELFKLKYEPNKA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgccaaccctcccaaaattgatgagcaaattccatgggtggaaaaatatagg
cctagtgtgttaaatgatataatatcacatgagcaagttatatcaactatacggaagttt
gttgagaaaggtgaactgccacatttgcttttacatggtccacccggtacaggaaaaaca
tctaccattttagcagtatgtaaagaactatatggagaatcgagaagctcttttgtatta
gaattaaatgcatcagatgacagaggtataactgtggttcgagagcaaataaaaacattt
gctgaatcaaaaaatcattataatatttgtgaaaggacctctttaaaactgattatatta
gatgaagctgatcatatgacctttcctgcgcaaaatgctatgagaagaattatggaaaat
tatgctaaaaatgtccgtttttgcttaatatgtaattatgttaataagattacaccagct
atacaatcaagatgcacatcatttcgattttctccattaaaagaagaatatatgctaaat
aaagctttagatatagcaaaatcagaaaatgtaaatcttacaaaaaatggtgtagagagt
cttatacgtgttgggcgtggggatatgagaagaattttaaattgtttacaagtagtatca
ctaagtcataaaaatatggttattgatgaaaatgtaatattatctacgttagatattcca
ttacctactgaaataaaattcatattagagcatcttacaaaaagtactataaaagaatca
tatgaaattatcacaaaattgcaagaagataaaggatattcaataaaagatattatgata
tgtttatatgaaactgttttaacttatgattatcctgattcggccatttgccttcttctt
aaaaattttggagaaatagaagaaagatgcgcttctggtactactgagcaaataacctta
tcttctctaattagcgcatttattgaatttcgaaatgaattatttaaattgaaatatgaa
ccaaacaaagcataa
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