Plasmodium berghei: PBANKA_1337100
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Entry
PBANKA_1337100 CDS
T01111
Name
(RefSeq) splicing factor 1, putative
KO
K13091
RNA-binding protein 23/39
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1337100
Spliceosome [BR:
pbe03041
]
Common components
Common spliceosomal components
General mRNP proteins
PBANKA_1337100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
55151717
NCBI-ProteinID:
XP_034423527
UniProt:
A0A509AX97
LinkDB
All DBs
Position
13:1462285..1464511
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AA seq
710 aa
AA seq
DB search
MEEDNEHFDEKETTLDKKKNKKNINGTVKSQINDNSESDENNCNSNTDEESLLKNDKKRK
QSAKEKGNKSNVTRRGRRKREETEEDTDTDKNEETDIIEKDENSNSSENGIAQKSKSKTG
LEKNDSKHTSERSELGDEKEEQSDNDENEKRKKERYKNIKHYNDERNSNSNRDKSSDSES
DQDERSRKREDKSESYKEDYHKKRRRKPHSSNDTNSSDDDEKRSHKSRSVKKRRHERRER
RRHRGRSRGRSRDRSRDRSRDRSRDRSRDKSRDRSRDRSRDRNRYRDRDRERRRERERER
MRREREIEREKRREERRKKEELEEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDI
QCIKDQRSGKSKGVAYVEFYTQESVIKALSVNGYMLKNRPIKVQSSQAEKNRAAKATKHH
PIDPNDIPLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQF
HKASEAIEAMTVMNGMEVAGREIKVSYAQDSKYLLATDALKDLNIPNLNQIKAAAQGVQK
SANKEEEQDNEKIDNDDDDGGGLITGASSKIALMQKLQRDTIIDASIPNTYAIGTNAIAR
NSLNNVSSPLNNVTSNIVLCNMFSPNDSNIGSDPDFFSDIIEDVREECSKYGNIIKIWLN
TKNIDGKIYIKYTKNDESLKAFQCLNGRYFGGSLINAYFISNATWESTCC
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagataatgagcattttgatgaaaaagaaacaactcttgacaaaaagaaaaat
aaaaaaaatataaatggaactgtaaaatctcaaattaatgataatagtgaaagtgacgaa
aataattgtaattctaatacagatgaagaatctttattgaaaaatgataaaaagcgaaaa
caaagtgcaaaggaaaaaggaaataaaagtaatgtaacgagaagagggcgaaggaaaagg
gaagagacagaggaagatacagataccgacaaaaatgaagaaactgatatcattgaaaaa
gatgaaaacagtaatagtagtgaaaatggaatagcacaaaaaagtaaaagtaaaactggg
ttagaaaaaaatgatagcaaacatacctcagaacgttcagaactaggtgacgaaaaagag
gaacaaagtgataatgacgaaaatgaaaaaagaaaaaaggaaagatataaaaatataaag
cattataatgatgaaaggaatagtaactcaaatagagacaaaagttctgattcagaaagt
gatcaagatgaaagaagtagaaaaagggaagataaatcggaaagttataaagaagattat
cataaaaaaaggaggagaaaaccacattcaagtaatgataccaattcaagtgacgatgat
gaaaaacggtcacataagtccagaagtgtcaaaaaaagaaggcacgaaagacgagaaagg
aggaggcaccgaggcagaagtcggggcagaagtagagacagaagtagagacagaagcaga
gacagaagtagagacagaagcagagacaaaagtagagacagaagcagagacagaagtaga
gacagaaacagatacagagatagggatcgtgagagaaggcgggaaagggaaagagaaaga
atgcgaagggaaagagaaattgaaagagaaaaaagaagagaagaaagacgtaaaaaagaa
gaattagaagaagcaaaaagagatgatttaacagtattagtattaaatttagatttaaaa
gcagatgaaagagatatatatgaatttttttcagaagttgctggaaaagttcgtgatata
caatgtataaaagatcaaaggtctgggaaatcaaaaggtgtagcatatgtagaattctat
acacaagaatctgttataaaggcattatcagttaatggttatatgttaaaaaacagacca
attaaggttcaatcatctcaagctgaaaaaaatagagcagcaaaagctactaaacatcat
ccaattgatcctaatgacattccattaaaattatatatagggggattattaggtccttta
agtaatataacagaacaagaattgaaacaattatttaatccttttggagatatattagat
gtagaaatacatagggatccatatactggtaaatcaaaaggttttgggttcatacaattt
cataaagcttcagaagctattgaagctatgactgtaatgaatggaatggaagtcgctggt
cgagaaataaaagttagttatgctcaagattcaaaatatttattagcaactgatgcatta
aaagatttaaatattccaaatttgaatcaaataaaagcagcagcacaaggggtacaaaaa
tctgcaaataaagaggaggagcaagataatgaaaaaattgacaatgatgatgatgatgga
ggtggattaataactggggcaagtagcaaaattgctttaatgcaaaaattgcaaagagat
acaataattgatgcttcgattccaaacacatatgctattggaacaaatgctatagcaaga
aattcgttaaataatgtatcgagccctttaaataatgtaacatcaaacattgttttatgt
aatatgttttcaccaaatgatagtaacattggttcggatcctgatttttttagtgacata
attgaagatgtaagggaggaatgtagtaaatatggtaatattattaaaatatggttaaat
actaaaaatatagatggtaagatttatattaaatataccaaaaatgatgaatcattaaaa
gcttttcaatgcttaaatggcagatattttggaggttcactcataaatgcctattttatt
agtaatgctacatgggaatccacatgctgctaa
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