Plasmodium berghei: PBANKA_1344300
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Entry
PBANKA_1344300 CDS
T01111
Name
(RefSeq) chromatin assembly factor 1 subunit B, putative
KO
K10752
histone-binding protein RBBP4
Organism
pbe
Plasmodium berghei
Pathway
pbe03082
ATP-dependent chromatin remodeling
pbe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PBANKA_1344300
03083 Polycomb repressive complex
PBANKA_1344300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_1344300
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PBANKA_1344300
Histone modification proteins
HAT complexes
HATB complex
PBANKA_1344300
HDAC complexes
Sin3A-HDAC complex
PBANKA_1344300
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PBANKA_1344300
PRC2.2
PBANKA_1344300
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PBANKA_1344300
Heterochromatin formation proteins
Other heterochromatin formation proteins
PBANKA_1344300
Chromatin remodeling factors
NuRD complex
PBANKA_1344300
NuRF complex
PBANKA_1344300
NuRF complex (fruit fly)
PBANKA_1344300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_SCAP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
55151790
NCBI-ProteinID:
XP_034423600
UniProt:
A0A509AR55
LinkDB
All DBs
Position
13:complement(1748760..1750301)
Genome browser
AA seq
513 aa
AA seq
DB search
MMDVIAEKNKSYDLNNAYEPKYPEESEANENTKVDITHEKYIIWRRNTPFLYSSLLKHKL
DWPSLTVEFIGVENSFKSKTGYFTNKILLGTHTSNQDSEYVYIGETKSPLYSAKEDVLQY
ENYTGFINNKKKKRGHPLPSFEIKAKLLHPGEVIRATHLPNNSFFIVTQTYNGNILLFDY
TKHPSFPSDITTCYPQMILKGHGSEGSGLCWNINKIYDNYTNVGDNKNTKNDIKDNENDT
ENANDENFGEINTSNLLLASCASDGSICLWDINKGTKSNDVPRTYGINKVGKGADYNIKI
YENTPTLSPLCTWINKNEETTLNDIFFHSKFNNILGVCDDNGYMSIYDIRKKNFFTKPEI
SYKDHNQPMNSFSFDNFSEYIFACGYSDGLISIWDMRCNKESLLKIDYHTQSINRIKFSL
MQSGIFGTCSDDGTACIWDISRNSENYEQIKKLEDDIYNNPKKIPKQLLFVHGGHIGSVY
DMSWANNTTFLAATVGVDNSLQVWNMNEQFMFQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtaatagctgaaaaaaataaaagttatgatttaaataatgcatacgaacct
aaatatcccgaagaaagtgaagccaatgaaaataccaaagttgatataacacatgaaaag
tatataatatggagaagaaataccccatttttatatagttcgcttttaaaacataaatta
gattggccttcgttaactgttgaatttataggtgttgaaaattcttttaaatcaaaaaca
ggatattttactaataagatattattaggtacacacacatccaatcaagattctgaatat
gtatatataggtgaaacaaaatctccattatattcagctaaagaagatgtattacaatat
gaaaattatactggctttataaataataaaaaaaaaaaaagaggccatccattaccgtct
tttgaaattaaagcaaaattgttacatccaggagaagttataagagcaacacatttacca
aataattccttttttatagttacacaaacttataatggaaatatattattatttgattat
acaaaacatccttctttcccttccgatataactacttgctatccacaaatgatattaaaa
gggcatgggagtgaaggtagtgggctatgttggaatataaataaaatatatgataactat
actaatgttggtgataataagaatacaaagaatgacataaaagacaatgaaaacgataca
gaaaacgcaaatgatgaaaattttggtgaaataaatacaagtaatttactattagcttca
tgcgcttcagatggaagtatatgtctttgggatattaacaagggaacaaaaagtaatgat
gttcccagaacatatggaataaataaagtaggaaaaggtgcagattataatataaaaata
tatgaaaatactccaactttaagccctttatgtacatggataaataaaaatgaagaaacg
acattaaatgatattttttttcattcaaaatttaataatattcttggtgtatgcgatgat
aatggatatatgagcatatatgatataagaaaaaaaaatttttttacaaaaccagaaatt
agttataaagatcataatcaaccaatgaatagtttttcttttgataatttttctgaatat
atttttgcttgtggatatagtgacggtttaatatctatttgggatatgaggtgcaataaa
gagtctttacttaaaattgattatcacacacaaagtattaacagaattaaattttccctg
atgcagtcaggtatttttggaacatgttcagatgacggaactgcgtgtatttgggacatt
tccagaaattcagaaaattatgagcaaatcaaaaaattagaagatgatatttataacaat
cctaaaaaaatacctaagcagttattgtttgtgcatggggggcatattggaagtgtatat
gacatgtcttgggcaaacaacaccaccttcctcgccgctacggttggtgttgacaattct
ttgcaagtatggaatatgaatgaacagttcatgtttcagtga
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