Plasmodium berghei: PBANKA_1354000
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Entry
PBANKA_1354000 CDS
T01111
Name
(RefSeq) RNA lariat debranching enzyme, putative
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
pbe
Plasmodium berghei
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1354000
03009 Ribosome biogenesis [BR:
pbe03009
]
PBANKA_1354000
Spliceosome [BR:
pbe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PBANKA_1354000
Ribosome biogenesis [BR:
pbe03009
]
Eukaryotic type
90S particles
RNase
PBANKA_1354000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
CCDC144C
Motif
Other DBs
NCBI-GeneID:
55151893
NCBI-ProteinID:
XP_034423697
UniProt:
A0A509AY45
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Position
13:complement(2044110..2045477)
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AA seq
455 aa
AA seq
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MIVAVVGCTHGELDLVYNTLNKLEKENNFKVNIVICCGDFQSIRYNIDNESLNVPNKYKK
EVNDFTKYFSGEKKAKILTIFIGGNHEAMNVLKQLYYGGWVAPNIYYLGYSNVHNINGIR
ICSLSGIYKKYNFYKTYNECYPYNNASKVSAYHIRKYEIEKLKILKNKVDIIVTHDWPNN
IEKHGNLNDLLKSKSYFKTEILTNTLGNPQTEILLNKLKPNFWFAAHLHVKYSSIYIHND
KINYTKFLSLDKAEPHRHFIQILNFEKIQNSLQLKMDHVPNTLKSAPQNLDPLSSDPEKE
TEKVEAEKGEPEKVEAEKEGTNDNVNSILEENQKLVGTSIDEKEKYYLCYDIEWLAIIKA
NHNLISINSDKNYNLEDLKYPTNEDFEFVKEKLKKLKQISINGKQYYPINGYNTPNYKNL
IEQRKYFLNLLDLEELSIYNGYELNFFNEEFKKLN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagcagttgttggatgtacacatggggaactggatttggtttataacacatta
aataaattagagaaagaaaataattttaaagttaatatagtaatatgttgtggtgatttt
caaagtattcgatataatattgataatgaatccttaaatgtacctaataaatataaaaaa
gaagtaaatgactttacaaaatattttagcggagaaaaaaaagcaaaaatattaacaatt
tttattggaggtaatcatgaagctatgaatgttttgaaacaattatattatggtggttgg
gttgctccaaatatttattatttaggatattcaaatgttcataatataaatggcataaga
atatgtagtctaagtggtatatacaaaaaatataatttttataaaacatataatgaatgc
tatccatataataatgcttctaaagtaagtgcatatcatatacgcaaatatgaaattgaa
aaattaaaaatattaaaaaataaagttgatataattgtcactcatgattggccaaataat
attgaaaaacatggaaatttaaatgacttattaaaatctaaatcttatttcaaaacagaa
attttaactaatacattaggaaatccacaaaccgaaattttgttaaataaattaaaacca
aatttttggtttgcagctcatttacatgtaaaatattcatctatttatattcacaatgat
aaaataaattataccaaatttttatctttagataaagctgagcctcataggcattttata
caaattttaaatttcgaaaaaattcaaaattctttgcaacttaagatggatcatgttcca
aacaccctcaagtctgctccacaaaatctcgaccccctatctagcgacccagaaaaagaa
acggaaaaagttgaagcagaaaaaggagagccagaaaaagtggaagcagaaaaagagggg
actaatgataatgtgaattccattttggaagaaaaccaaaaattggtaggcacttcgata
gatgaaaaagaaaaatattatttatgttatgacatagaatggctagctataataaaagct
aatcacaatttgatttctataaatagtgataaaaattataatttagaagatttaaaatat
ccaacaaatgaagattttgaatttgttaaagaaaaattaaaaaaattaaaacaaatttct
ataaatggaaaacaatattatcctataaatggttacaatacaccaaattataaaaattta
atagaacaaagaaaatattttttaaatcttttggatttagaagaacttagtatatataat
ggctatgaacttaacttttttaatgaagaattcaaaaaattaaattaa
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