Plasmodium berghei: PBANKA_1360000
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Entry
PBANKA_1360000 CDS
T01111
Name
(RefSeq) DNA topoisomerase 3, putative
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03440
Homologous recombination
pbe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBANKA_1360000
03460 Fanconi anemia pathway
PBANKA_1360000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_1360000
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1360000
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PBANKA_1360000
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Topoisomerases
PBANKA_1360000
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
PBANKA_1360000
FA (Fanconi anemia) pathway
PBANKA_1360000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
55151956
NCBI-ProteinID:
XP_034423756
UniProt:
A0A509AQY8
LinkDB
All DBs
Position
13:2286751..2288778
Genome browser
AA seq
675 aa
AA seq
DB search
MGRIKVLNVAEKPSVASAIVSILSKGESNKKKSYSKYNPVFTFDYKMENETWSMFVTSVT
GHLTDQKFDDKYKNWNNTDPHELFDAKITIYIDKDKKPIENNLKKYSKDCNVLILWLDCD
REGEHICFEVINACSVTNKKLKIHRAQFSAVTEKDIKYAINNLKSPNKNLAQSVDVRREI
DLRMGSIFTRFMTIRYFKLVQNDTKIISYGPCQFPTLGFVVNRYLQIKNFNNEYYWTIKM
GYLYQDKNSNNSNLFLDNIGKNKKEREKKKKKGKKKKNCSDYYSSDDDANNSYGINNRPY
SSNTNYVVDFTWSRLKLFDHLGVVLIYEDLLKNPLCRISNIFEKEVKKYRPFPLNTLQMT
KLVSKYFHISSKECMNIAEKLYSKGYISYPRTETNYFVDSMNLRKIIHELKKNNIFGNYA
TKLAEKNSCKPRKGKLNDKAHPPIHPVKNMNKANNVDFKEWKIYEFICRHFLAVCSDDAI
GFDTKVVANIGEEQFYCKGLKIKNKNYLEIYIYEKWNDKILPPFQINDEFYPYSLVVEEG
ITQPPKYLSESDLLSLMDKYGIGTDATMHEHIENIQKRNYVYKNSKNLFIPTKLGIALIL
SYKKFKDIGVDLTEPSLRAKMERDMFLVASGEKGKNEIIRNYIDIMKYIYQEIYNRIDLL
DENINYYINNPKIQS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtataaaagttctaaatgtggctgaaaagccatcggttgcatcagcaattgtt
tcgatccttagtaaaggggaaagtaataaaaaaaaaagttatagtaaatataatcctgta
ttcacatttgattataaaatggaaaatgaaacatggtcgatgtttgtaacatctgtaacg
ggtcatttaacagatcaaaaatttgatgataaatacaagaattggaataatacagatccg
catgaactttttgacgctaaaataactatatatatagacaaagataaaaagcctattgaa
aataatttaaaaaaatattcaaaagattgcaatgttttaattttatggttagattgtgat
cgagaaggagagcatatttgttttgaagtaataaatgcatgttctgttactaataagaag
ttaaaaattcacagagctcagttttcagctgttacagaaaaagatataaaatatgcaatt
aacaatttgaagtccccaaataaaaacttggctcaaagcgtagatgttagaagagaaatt
gatttaagaatgggttccattttcactaggtttatgactattcggtattttaaattagta
caaaacgacacaaaaattattagttacggaccatgtcaatttcctacattaggatttgta
gtaaatagatatctacaaataaaaaattttaacaacgaatactattggactatcaaaatg
ggatatctatatcaggataaaaatagtaataattctaatctctttttggacaatattggg
aagaataaaaaagagcgcgaaaaaaaaaaaaaaaaaggtaaaaaaaaaaaaaattgcagc
gattattatagtagcgatgatgatgcaaataatagttatggtataaacaatagaccatat
tcatcaaacacaaattacgttgtagattttacctggtctcgattaaaattatttgaccat
ttaggagttgttttaatttatgaagacttgttaaaaaatcctttatgtaggatatcaaac
atttttgaaaaagaagtaaaaaaatatcgaccattccctctaaatacattacaaatgact
aaactggtttcaaagtattttcatatatcttcaaaagaatgtatgaatatagctgaaaag
ttatacagcaaaggttatattagttatcctaggacagaaactaattattttgtagattct
atgaacttacgaaaaatcatacacgaattgaaaaaaaataatatttttggtaattatgct
acgaaattagctgaaaaaaatagttgtaagcctagaaaagggaaattaaatgataaagcg
cacccccctatacacccagttaaaaatatgaacaaggcaaacaatgttgattttaaagaa
tggaaaatatatgaatttatttgtagacattttttagctgtttgtagtgatgatgcaata
ggttttgatacaaaagttgttgctaatataggagaggaacaattttattgcaaaggatta
aaaataaaaaataaaaattatctagaaatttacatatatgagaaatggaatgataaaatt
ttgccgccttttcaaattaatgatgagttttatccatatagtttagtagtcgaagaagga
ataacacaaccaccaaaatatttatccgaatctgatttgttgtcacttatggataaatat
ggtataggaactgatgcaacaatgcatgagcatatagaaaatattcaaaaacgaaattat
gtttataaaaattctaaaaatttatttattccaacgaaattgggaattgcattaatattg
tcctataaaaaatttaaagatataggtgtagatttaaccgagccatctttaagagctaag
atggaaagagacatgtttttagtagcttcaggtgaaaagggaaaaaatgaaattataaga
aattatattgatataatgaaatatatatatcaggaaatatacaacaggatagatttactc
gatgaaaatatcaattattatataaataatccaaaaatacagagttag
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