Plasmodium berghei: PBANKA_1405400
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Entry
PBANKA_1405400 CDS
T01111
Name
(RefSeq) U1 small nuclear ribonucleoprotein A, putative
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1405400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1405400
Spliceosome [BR:
pbe03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
PBANKA_1405400
Complex B
PBANKA_1405400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_YTH1
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
55152084
NCBI-ProteinID:
XP_034423876
UniProt:
A0A509ARB2
LinkDB
All DBs
Position
14:<271020..>272695
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AA seq
468 aa
AA seq
DB search
MSSNDSLNETCSNDNNKENAPNPDDNNLNEDKDNPNNENSGAININNSEQINNNGRLNNA
GSRKWSYDIPPPPDSKKYPSENNSNDDSNKNNSINSQNNPIFTNANYNNKMMSNVKGIYN
SYPQNMNTPMNMFPNADGMTNNLPLAMYQNAHNMLYNPMNYMNSKTYLKLLKYNKVITAD
PNIPPNETLYIKNLNDKIKCEDMKKSLKNIFNQYGLIEDIIVMKSFWRKGQAWIVYDTIE
SSTKALNSLQGFVLFGKIMQINYSHNKSDVHTKRNGTFIERSKDPKKPKQIIEREKKQKE
IFEKMQQNYFEMQINHIKAMHNDELEKNKNFDLSQMDKETLIARAQQKAIEEKKRKKGED
PLQNNANYNIPSIHPPHFYAMNSYAPIQNNPVIPYKILFVENVDENVNTEAFNDIFKAFS
GFVEARIIPQRNVAFVDYTDESSATSAMKALQNYELQGSKLKISYAKR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaacgattcattaaatgaaacatgttccaatgataacaataaggaaaatgct
ccgaatccggatgataataacttaaatgaagacaaagataatccaaataatgaaaattcg
ggcgctataaatattaataactcagaacaaattaataataatggccgattgaataatgct
ggaagcagaaaatggagctatgatatacctccccctccagattcaaaaaaataccctagc
gaaaataatagcaacgatgatagtaataaaaataattctataaactcacaaaataatccc
atatttacaaacgcaaattataataacaaaatgatgagcaatgtaaagggcatatataat
tcgtaccctcaaaatatgaatacgccaatgaatatgtttcccaatgcagatgggatgaca
aataatttaccattagcaatgtatcaaaatgcccataatatgttatataatcccatgaat
tatatgaatagtaaaacttatttaaaacttttaaaatataacaaagtaataacagcagat
cctaatatcccacccaatgaaacattgtatataaaaaatttaaatgataaaataaaatgt
gaagatatgaaaaaaagtttaaaaaacatttttaaccaatatgggctaattgaagatata
attgttatgaaatctttttggagaaagggtcaagcttggattgtatatgataccatcgaa
agttcaactaaagctttaaattcattgcaaggttttgttttattcggaaaaattatgcaa
ataaattattcacataataaaagtgatgtgcatacaaaaagaaatggcacttttatagaa
agatcaaaagaccccaaaaaacctaaacaaattattgaacgagaaaaaaaacaaaaagaa
atttttgaaaaaatgcaacaaaattattttgaaatgcaaataaaccatattaaagctatg
cataatgatgaattggaaaaaaataaaaattttgatttaagtcaaatggataaagaaaca
ttaatagcccgagctcagcaaaaagcaatcgaagaaaaaaaacgcaaaaaaggtgaagat
cccttacaaaataatgctaattacaatattcctagtattcatcccccccatttttatgct
atgaatagctatgcaccaattcaaaacaatcctgtaattccatataaaatattatttgtt
gaaaatgttgatgaaaatgttaatactgaagcttttaatgatatatttaaagccttttca
ggatttgttgaagccagaattattccacagagaaatgttgcatttgttgattatacagac
gaatcgtctgcaacatccgcaatgaaagccttgcaaaattacgaattacaaggatccaaa
ttaaaaatatcatatgcgaaacgataa
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